Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 AL049830.1-201ENST00000468034 425 ntBASIC3□□□□□ -1.93
TMEM39AQ9NV64 Y_RNA.666-201ENST00000516187 112 ntBASIC3□□□□□ -1.93
TMEM39AQ9NV64 AC024995.1-201ENST00000523014 93 ntBASIC3□□□□□ -1.93
TMEM39AQ9NV64 AP002004.2-201ENST00000531656 154 ntBASIC3□□□□□ -1.93
TMEM39AQ9NV64 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3□□□□□ -1.93
TMEM39AQ9NV64 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3□□□□□ -1.93
TMEM39AQ9NV64 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3□□□□□ -1.93
TMEM39AQ9NV64 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3□□□□□ -1.93
TMEM39AQ9NV64 AC093831.2-201ENST00000624393 3427 ntBASIC3□□□□□ -1.93
TMEM39AQ9NV64 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3□□□□□ -1.93
TMEM39AQ9NV64 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3□□□□□ -1.93
TMEM39AQ9NV64 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TMEM39AQ9NV64 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
TMEM39AQ9NV64 RNU6-862P-201ENST00000362804 105 ntBASIC2.99□□□□□ -1.93
TMEM39AQ9NV64 SNORD24-201ENST00000383884 75 ntBASIC2.99□□□□□ -1.93
TMEM39AQ9NV64 MIR627-201ENST00000384979 97 ntBASIC2.99□□□□□ -1.93
TMEM39AQ9NV64 RNY4P18-201ENST00000391107 89 ntBASIC2.99□□□□□ -1.93
TMEM39AQ9NV64 SNORA26.7-201ENST00000391288 122 ntBASIC2.99□□□□□ -1.93
TMEM39AQ9NV64 Y_RNA.630-201ENST00000411370 108 ntBASIC2.99□□□□□ -1.93
TMEM39AQ9NV64 MTATP6P21-201ENST00000440681 189 ntBASIC2.99□□□□□ -1.93
TMEM39AQ9NV64 RPS26P45-201ENST00000471748 340 ntBASIC2.99□□□□□ -1.93
TMEM39AQ9NV64 AL163195.1-201ENST00000496941 348 ntBASIC2.99□□□□□ -1.93
TMEM39AQ9NV64 AC087685.1-201ENST00000587507 141 ntBASIC2.99□□□□□ -1.93
TMEM39AQ9NV64 AL022345.2-201ENST00000606307 135 ntBASIC2.99□□□□□ -1.93
TMEM39AQ9NV64 AL449363.1-201ENST00000617815 186 ntBASIC2.99□□□□□ -1.93
TMEM39AQ9NV64 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
TMEM39AQ9NV64 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.99□□□□□ -1.93
TMEM39AQ9NV64 SNORA63.4-201ENST00000362763 126 ntBASIC2.98□□□□□ -1.93
TMEM39AQ9NV64 RNU6-888P-201ENST00000363010 101 ntBASIC2.98□□□□□ -1.93
TMEM39AQ9NV64 RNA5SP493-201ENST00000364115 91 ntBASIC2.98□□□□□ -1.93
TMEM39AQ9NV64 Y_RNA.242-201ENST00000364473 110 ntBASIC2.98□□□□□ -1.93
TMEM39AQ9NV64 RNU6-1292P-201ENST00000383856 107 ntBASIC2.98□□□□□ -1.93
TMEM39AQ9NV64 MIR512-1-201ENST00000384913 84 ntBASIC2.98□□□□□ -1.93
TMEM39AQ9NV64 MIR522-201ENST00000385071 87 ntBASIC2.98□□□□□ -1.93
TMEM39AQ9NV64 UBBP3-201ENST00000445497 241 ntBASIC2.98□□□□□ -1.93
TMEM39AQ9NV64 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.98□□□□□ -1.93
TMEM39AQ9NV64 RNU6-693P-201ENST00000516134 107 ntBASIC2.98□□□□□ -1.93
TMEM39AQ9NV64 ZNF861P-201ENST00000588126 639 ntBASIC2.98□□□□□ -1.93
TMEM39AQ9NV64 AC108081.1-201ENST00000604358 221 ntBASIC2.98□□□□□ -1.93
TMEM39AQ9NV64 CTSLP2-204ENST00000629029 392 ntBASIC2.98□□□□□ -1.93
TMEM39AQ9NV64 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TMEM39AQ9NV64 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
TMEM39AQ9NV64 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
TMEM39AQ9NV64 SNORD58C-201ENST00000365223 64 ntBASIC2.97□□□□□ -1.93
TMEM39AQ9NV64 MIR802-201ENST00000390235 94 ntBASIC2.97□□□□□ -1.93
TMEM39AQ9NV64 Y_RNA.617-201ENST00000410920 90 ntBASIC2.97□□□□□ -1.93
TMEM39AQ9NV64 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.97□□□□□ -1.93
TMEM39AQ9NV64 FTH1P12-201ENST00000432137 551 ntBASIC2.97□□□□□ -1.93
TMEM39AQ9NV64 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.97□□□□□ -1.93
TMEM39AQ9NV64 AF228730.3-201ENST00000436691 102 ntBASIC2.97□□□□□ -1.93
TMEM39AQ9NV64 SNRPGP13-201ENST00000442212 177 ntBASIC2.97□□□□□ -1.93
TMEM39AQ9NV64 RN7SL75P-201ENST00000461926 281 ntBASIC2.97□□□□□ -1.93
TMEM39AQ9NV64 PDCD5P2-201ENST00000507570 312 ntBASIC2.97□□□□□ -1.93
TMEM39AQ9NV64 SNORD33.1-201ENST00000516213 88 ntBASIC2.97□□□□□ -1.93
TMEM39AQ9NV64 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.97□□□□□ -1.93
TMEM39AQ9NV64 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.97□□□□□ -1.93
TMEM39AQ9NV64 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
TMEM39AQ9NV64 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
TMEM39AQ9NV64 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
TMEM39AQ9NV64 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TMEM39AQ9NV64 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
TMEM39AQ9NV64 SNORD68-201ENST00000363214 84 ntBASIC2.96□□□□□ -1.94
TMEM39AQ9NV64 RNU6-23P-201ENST00000363283 107 ntBASIC2.96□□□□□ -1.94
TMEM39AQ9NV64 SNORD56.5-201ENST00000364281 72 ntBASIC2.96□□□□□ -1.94
TMEM39AQ9NV64 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
TMEM39AQ9NV64 RN7SKP192-201ENST00000411291 327 ntBASIC2.96□□□□□ -1.94
TMEM39AQ9NV64 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.96□□□□□ -1.94
TMEM39AQ9NV64 Z98742.3-201ENST00000418637 326 ntBASIC2.96□□□□□ -1.94
TMEM39AQ9NV64 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.96□□□□□ -1.94
TMEM39AQ9NV64 Y_RNA.709-201ENST00000516952 92 ntBASIC2.96□□□□□ -1.94
TMEM39AQ9NV64 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.96□□□□□ -1.94
TMEM39AQ9NV64 AC108206.1-201ENST00000570186 4159 ntBASIC2.96□□□□□ -1.94
TMEM39AQ9NV64 MTND5P32-201ENST00000560711 1802 ntBASIC2.96□□□□□ -1.94
TMEM39AQ9NV64 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
TMEM39AQ9NV64 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TMEM39AQ9NV64 AC104389.3-201ENST00000445629 235 ntBASIC2.95□□□□□ -1.94
TMEM39AQ9NV64 Y_RNA.651-201ENST00000459380 103 ntBASIC2.95□□□□□ -1.94
TMEM39AQ9NV64 RNU6-781P-201ENST00000516377 101 ntBASIC2.95□□□□□ -1.94
TMEM39AQ9NV64 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.95□□□□□ -1.94
TMEM39AQ9NV64 MIR3169-201ENST00000578032 83 ntBASIC2.95□□□□□ -1.94
TMEM39AQ9NV64 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.95□□□□□ -1.94
TMEM39AQ9NV64 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TMEM39AQ9NV64 SNORD115-3-201ENST00000363100 82 ntBASIC2.94□□□□□ -1.94
TMEM39AQ9NV64 RNU6-1164P-201ENST00000364428 107 ntBASIC2.94□□□□□ -1.94
TMEM39AQ9NV64 MIR548A2-201ENST00000384956 97 ntBASIC2.94□□□□□ -1.94
TMEM39AQ9NV64 AL021397.1-201ENST00000451806 248 ntBASIC2.94□□□□□ -1.94
TMEM39AQ9NV64 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.94□□□□□ -1.94
TMEM39AQ9NV64 AC026271.5-201ENST00000577873 130 ntBASIC2.94□□□□□ -1.94
TMEM39AQ9NV64 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TMEM39AQ9NV64 AL670379.3-201ENST00000605040 251 ntBASIC2.94□□□□□ -1.94
TMEM39AQ9NV64 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
TMEM39AQ9NV64 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TMEM39AQ9NV64 RNA5SP289-201ENST00000362332 137 ntBASIC2.93□□□□□ -1.94
TMEM39AQ9NV64 SNORD77.3-201ENST00000391113 65 ntBASIC2.93□□□□□ -1.94
TMEM39AQ9NV64 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.93□□□□□ -1.94
TMEM39AQ9NV64 RNU4-53P-201ENST00000410828 140 ntBASIC2.93□□□□□ -1.94
TMEM39AQ9NV64 AC092427.1-202ENST00000430569 476 ntBASIC2.93□□□□□ -1.94
TMEM39AQ9NV64 AC099677.2-201ENST00000436385 175 ntBASIC2.93□□□□□ -1.94
TMEM39AQ9NV64 RN7SKP19-201ENST00000516016 252 ntBASIC2.93□□□□□ -1.94
TMEM39AQ9NV64 RNU6-589P-201ENST00000516485 107 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms