Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 HSPE1P13-201ENST00000451143 297 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 RNU7-107P-201ENST00000459121 61 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 RNU6-221P-201ENST00000459541 99 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.14□□□□□ -2.07
EBF3Q9H4W6 RNU6-659P-201ENST00000516454 104 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 RNU6-965P-201ENST00000516721 96 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 POLR3GP1-201ENST00000594073 261 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 AL355297.2-201ENST00000604792 129 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 MIR6840-201ENST00000611937 71 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 Y_RNA.783-201ENST00000613546 102 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 CENPCP1-201ENST00000533085 2578 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 AC092881.1-201ENST00000638218 2733 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 RNU6-1325P-201ENST00000364905 105 ntBASIC2.13□□□□□ -2.07
EBF3Q9H4W6 RNU6-728P-201ENST00000365375 104 ntBASIC2.13□□□□□ -2.07
EBF3Q9H4W6 Y_RNA.393-201ENST00000383936 102 ntBASIC2.13□□□□□ -2.07
EBF3Q9H4W6 RNU6-1323P-201ENST00000384025 107 ntBASIC2.13□□□□□ -2.07
EBF3Q9H4W6 RNU6-80P-201ENST00000384195 107 ntBASIC2.13□□□□□ -2.07
EBF3Q9H4W6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.13□□□□□ -2.07
EBF3Q9H4W6 RNU6-57P-201ENST00000411348 103 ntBASIC2.13□□□□□ -2.07
EBF3Q9H4W6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.13□□□□□ -2.07
EBF3Q9H4W6 RNU6-991P-201ENST00000516168 107 ntBASIC2.13□□□□□ -2.07
EBF3Q9H4W6 AL359881.1-201ENST00000602916 267 ntBASIC2.13□□□□□ -2.07
EBF3Q9H4W6 AC120024.3-201ENST00000603167 156 ntBASIC2.13□□□□□ -2.07
EBF3Q9H4W6 AL021707.8-201ENST00000609428 183 ntBASIC2.13□□□□□ -2.07
EBF3Q9H4W6 snoZ196.1-201ENST00000625269 89 ntBASIC2.13□□□□□ -2.07
EBF3Q9H4W6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
EBF3Q9H4W6 MIR6844-201ENST00000637122 62 ntBASIC2.13□□□□□ -2.07
EBF3Q9H4W6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
EBF3Q9H4W6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
EBF3Q9H4W6 SNORA38-201ENST00000363946 132 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 RNA5SP125-201ENST00000364843 120 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 Y_RNA.294-201ENST00000364916 102 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 RNU6-117P-201ENST00000365415 107 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 MIR539-201ENST00000365690 78 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 RNU6-418P-201ENST00000384035 107 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 RNA5SP511-201ENST00000410487 115 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 RPS27P1-201ENST00000450552 247 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 AL021397.1-201ENST00000451806 248 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.12□□□□□ -2.07
EBF3Q9H4W6 AC010531.2-201ENST00000465012 153 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 AC018868.1-201ENST00000491307 315 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 AC093259.1-201ENST00000509755 300 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 AC010598.1-201ENST00000510378 103 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.12□□□□□ -2.07
EBF3Q9H4W6 RNA5SP20-201ENST00000515976 84 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 RNU4-57P-201ENST00000515980 135 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 RNU6-948P-201ENST00000516374 107 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 RNU2-34P-201ENST00000516534 121 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 RNU6-919P-201ENST00000516731 104 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 RNA5SP490-201ENST00000517141 136 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 MIR3646-201ENST00000578301 84 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 MIR5002-201ENST00000584713 97 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 AC011603.4-201ENST00000611325 277 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 U4atac.1-201ENST00000618345 95 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 TUG1_4.1-201ENST00000619464 181 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 AP001340.1-201ENST00000624405 217 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.12□□□□□ -2.07
EBF3Q9H4W6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
EBF3Q9H4W6 AL391516.1-201ENST00000554380 2449 ntBASIC2.12□□□□□ -2.07
EBF3Q9H4W6 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
EBF3Q9H4W6 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
EBF3Q9H4W6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.11□□□□□ -2.07
EBF3Q9H4W6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
EBF3Q9H4W6 RNA5SP160-201ENST00000364866 120 ntBASIC2.11□□□□□ -2.07
EBF3Q9H4W6 Y_RNA.332-201ENST00000365271 113 ntBASIC2.11□□□□□ -2.07
EBF3Q9H4W6 RNU6-438P-201ENST00000365561 103 ntBASIC2.11□□□□□ -2.07
EBF3Q9H4W6 SNORA6-201ENST00000384033 151 ntBASIC2.11□□□□□ -2.07
EBF3Q9H4W6 RNU6-1235P-201ENST00000384559 107 ntBASIC2.11□□□□□ -2.07
EBF3Q9H4W6 Y_RNA.521-201ENST00000384560 114 ntBASIC2.11□□□□□ -2.07
EBF3Q9H4W6 RNU6-429P-201ENST00000384582 108 ntBASIC2.11□□□□□ -2.07
EBF3Q9H4W6 RN7SKP101-201ENST00000411376 320 ntBASIC2.11□□□□□ -2.07
EBF3Q9H4W6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.11□□□□□ -2.07
EBF3Q9H4W6 AL603825.1-201ENST00000438481 80 ntBASIC2.11□□□□□ -2.07
EBF3Q9H4W6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.11□□□□□ -2.07
EBF3Q9H4W6 RNU6-437P-201ENST00000459408 95 ntBASIC2.11□□□□□ -2.07
EBF3Q9H4W6 RNU6-498P-201ENST00000459468 107 ntBASIC2.11□□□□□ -2.07
EBF3Q9H4W6 RPL36AP21-201ENST00000490372 323 ntBASIC2.11□□□□□ -2.07
EBF3Q9H4W6 RPL23AP54-201ENST00000495129 419 ntBASIC2.11□□□□□ -2.07
EBF3Q9H4W6 RNU2-56P-201ENST00000516826 190 ntBASIC2.11□□□□□ -2.07
EBF3Q9H4W6 AC025647.1-201ENST00000517879 253 ntBASIC2.11□□□□□ -2.07
EBF3Q9H4W6 AC015720.1-201ENST00000565251 277 ntBASIC2.11□□□□□ -2.07
EBF3Q9H4W6 AC005972.2-201ENST00000604690 348 ntBASIC2.11□□□□□ -2.07
EBF3Q9H4W6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.11□□□□□ -2.07
EBF3Q9H4W6 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.11□□□□□ -2.07
EBF3Q9H4W6 RNU6-674P-201ENST00000363831 107 ntBASIC2.1□□□□□ -2.07
EBF3Q9H4W6 RNU6-978P-201ENST00000364371 103 ntBASIC2.1□□□□□ -2.07
EBF3Q9H4W6 RNU6-153P-201ENST00000364422 104 ntBASIC2.1□□□□□ -2.07
EBF3Q9H4W6 RNU6-484P-201ENST00000384016 107 ntBASIC2.1□□□□□ -2.07
EBF3Q9H4W6 RNY3P5-201ENST00000384127 102 ntBASIC2.1□□□□□ -2.07
EBF3Q9H4W6 Y_RNA.587-201ENST00000391210 103 ntBASIC2.1□□□□□ -2.07
EBF3Q9H4W6 AP001328.1-201ENST00000528550 176 ntBASIC2.1□□□□□ -2.07
EBF3Q9H4W6 AL929325.1-201ENST00000603096 117 ntBASIC2.1□□□□□ -2.07
EBF3Q9H4W6 MIR6845-201ENST00000613182 61 ntBASIC2.1□□□□□ -2.07
EBF3Q9H4W6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
EBF3Q9H4W6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
EBF3Q9H4W6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.09□□□□□ -2.07
EBF3Q9H4W6 RNU6-915P-201ENST00000364943 103 ntBASIC2.09□□□□□ -2.07
EBF3Q9H4W6 SNORA25B-201ENST00000365507 128 ntBASIC2.09□□□□□ -2.07
EBF3Q9H4W6 RNU6-597P-201ENST00000365620 102 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms