Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SNORD109A-201ENST00000459128 67 ntBASIC2.56□□□□□ -2
ARHGEF39Q8N4T4 RNU6-1333P-201ENST00000516162 93 ntBASIC2.56□□□□□ -2
ARHGEF39Q8N4T4 SNORA9.3-201ENST00000516383 129 ntBASIC2.56□□□□□ -2
ARHGEF39Q8N4T4 Y_RNA.692-201ENST00000516627 105 ntBASIC2.56□□□□□ -2
ARHGEF39Q8N4T4 AC007751.1-201ENST00000529260 376 ntBASIC2.56□□□□□ -2
ARHGEF39Q8N4T4 MIR3129-201ENST00000581095 76 ntBASIC2.56□□□□□ -2
ARHGEF39Q8N4T4 MIR3162-201ENST00000581818 82 ntBASIC2.56□□□□□ -2
ARHGEF39Q8N4T4 MIR4762-201ENST00000585261 75 ntBASIC2.56□□□□□ -2
ARHGEF39Q8N4T4 AL365205.2-201ENST00000594586 68 ntBASIC2.56□□□□□ -2
ARHGEF39Q8N4T4 SNORA28-201ENST00000606769 126 ntBASIC2.56□□□□□ -2
ARHGEF39Q8N4T4 MIR8054-201ENST00000620877 86 ntBASIC2.56□□□□□ -2
ARHGEF39Q8N4T4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
ARHGEF39Q8N4T4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.55□□□□□ -2
ARHGEF39Q8N4T4 RNU6-1290P-201ENST00000362957 109 ntBASIC2.55□□□□□ -2
ARHGEF39Q8N4T4 SNORA5B-201ENST00000363786 132 ntBASIC2.55□□□□□ -2
ARHGEF39Q8N4T4 U8.5-201ENST00000364528 136 ntBASIC2.55□□□□□ -2
ARHGEF39Q8N4T4 Y_RNA.261-201ENST00000364631 102 ntBASIC2.55□□□□□ -2
ARHGEF39Q8N4T4 MIR624-201ENST00000385217 97 ntBASIC2.55□□□□□ -2
ARHGEF39Q8N4T4 RNU2-52P-201ENST00000410680 190 ntBASIC2.55□□□□□ -2
ARHGEF39Q8N4T4 RNA5SP270-201ENST00000411361 118 ntBASIC2.55□□□□□ -2
ARHGEF39Q8N4T4 STAG3L5P-204ENST00000443759 179 ntBASIC2.55□□□□□ -2
ARHGEF39Q8N4T4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.55□□□□□ -2
ARHGEF39Q8N4T4 RNA5SP282-201ENST00000516355 108 ntBASIC2.55□□□□□ -2
ARHGEF39Q8N4T4 AL359881.1-201ENST00000602916 267 ntBASIC2.55□□□□□ -2
ARHGEF39Q8N4T4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
ARHGEF39Q8N4T4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ARHGEF39Q8N4T4 U8.1-201ENST00000362843 134 ntBASIC2.54□□□□□ -2
ARHGEF39Q8N4T4 RNU6-888P-201ENST00000363010 101 ntBASIC2.54□□□□□ -2
ARHGEF39Q8N4T4 SNORA1-201ENST00000384107 130 ntBASIC2.54□□□□□ -2
ARHGEF39Q8N4T4 HMGN2P39-201ENST00000398005 273 ntBASIC2.54□□□□□ -2
ARHGEF39Q8N4T4 MIR1283-2-201ENST00000408621 87 ntBASIC2.54□□□□□ -2
ARHGEF39Q8N4T4 RNA5SP184-201ENST00000411071 108 ntBASIC2.54□□□□□ -2
ARHGEF39Q8N4T4 SNORD45.4-201ENST00000516629 73 ntBASIC2.54□□□□□ -2
ARHGEF39Q8N4T4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.53□□□□□ -2
ARHGEF39Q8N4T4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.53□□□□□ -2
ARHGEF39Q8N4T4 RNU6-859P-201ENST00000362728 107 ntBASIC2.53□□□□□ -2
ARHGEF39Q8N4T4 RN7SKP200-201ENST00000410564 320 ntBASIC2.53□□□□□ -2
ARHGEF39Q8N4T4 Y_RNA.686-201ENST00000516548 134 ntBASIC2.53□□□□□ -2
ARHGEF39Q8N4T4 AC006023.1-201ENST00000603944 259 ntBASIC2.53□□□□□ -2
ARHGEF39Q8N4T4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
ARHGEF39Q8N4T4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
ARHGEF39Q8N4T4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.52□□□□□ -2.01
ARHGEF39Q8N4T4 ICE2P2-201ENST00000483823 2787 ntBASIC2.52□□□□□ -2.01
ARHGEF39Q8N4T4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
ARHGEF39Q8N4T4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ARHGEF39Q8N4T4 RNA5SP205-201ENST00000364653 136 ntBASIC2.52□□□□□ -2.01
ARHGEF39Q8N4T4 RNU6-1292P-201ENST00000383856 107 ntBASIC2.52□□□□□ -2.01
ARHGEF39Q8N4T4 RNU6-950P-201ENST00000384651 107 ntBASIC2.52□□□□□ -2.01
ARHGEF39Q8N4T4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
ARHGEF39Q8N4T4 RNU2-7P-201ENST00000410794 178 ntBASIC2.52□□□□□ -2.01
ARHGEF39Q8N4T4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.52□□□□□ -2.01
ARHGEF39Q8N4T4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.52□□□□□ -2.01
ARHGEF39Q8N4T4 RPL12P50-201ENST00000603116 116 ntBASIC2.52□□□□□ -2.01
ARHGEF39Q8N4T4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.52□□□□□ -2.01
ARHGEF39Q8N4T4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ARHGEF39Q8N4T4 AL161431.1-201ENST00000618966 4205 ntBASIC2.52□□□□□ -2.01
ARHGEF39Q8N4T4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
ARHGEF39Q8N4T4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ARHGEF39Q8N4T4 Y_RNA.336-201ENST00000365307 109 ntBASIC2.51□□□□□ -2.01
ARHGEF39Q8N4T4 SNORA80E-201ENST00000384744 137 ntBASIC2.51□□□□□ -2.01
ARHGEF39Q8N4T4 MTATP6P21-201ENST00000440681 189 ntBASIC2.51□□□□□ -2.01
ARHGEF39Q8N4T4 RN7SL499P-201ENST00000481141 276 ntBASIC2.51□□□□□ -2.01
ARHGEF39Q8N4T4 RNU5E-3P-201ENST00000515913 68 ntBASIC2.51□□□□□ -2.01
ARHGEF39Q8N4T4 RNVU1-2-201ENST00000516326 135 ntBASIC2.51□□□□□ -2.01
ARHGEF39Q8N4T4 Y_RNA.690-201ENST00000516603 95 ntBASIC2.51□□□□□ -2.01
ARHGEF39Q8N4T4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 Y_RNA.52-201ENST00000362760 96 ntBASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 Y_RNA.294-201ENST00000364916 102 ntBASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 RNU6-163P-201ENST00000384396 106 ntBASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 AL603914.1-201ENST00000401964 204 ntBASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 AL034345.1-201ENST00000407768 123 ntBASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 MIR548O-201ENST00000408583 114 ntBASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 RNU6-735P-201ENST00000410612 107 ntBASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 HMGN2P32-201ENST00000444648 269 ntBASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 RN7SKP179-201ENST00000516126 217 ntBASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 AC090049.2-201ENST00000550377 109 ntBASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 SNORD14A-201ENST00000606526 91 ntBASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 AC006441.5-201ENST00000612680 209 ntBASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 MIR6852-201ENST00000621699 66 ntBASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 SCARNA15.3-201ENST00000626315 122 ntBASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 SCARNA4.1-201ENST00000628597 123 ntBASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 MAPK10-266ENST00000641066 6555 ntBASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.5□□□□□ -2.01
ARHGEF39Q8N4T4 AL136360.1-201ENST00000503377 1900 ntBASIC2.49□□□□□ -2.01
ARHGEF39Q8N4T4 RNU6-268P-201ENST00000364174 107 ntBASIC2.49□□□□□ -2.01
ARHGEF39Q8N4T4 RNU1-109P-201ENST00000383960 147 ntBASIC2.49□□□□□ -2.01
ARHGEF39Q8N4T4 MIR520A-201ENST00000384862 85 ntBASIC2.49□□□□□ -2.01
ARHGEF39Q8N4T4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
ARHGEF39Q8N4T4 SNORA48.1-201ENST00000390879 135 ntBASIC2.49□□□□□ -2.01
ARHGEF39Q8N4T4 MIR891A-201ENST00000401237 79 ntBASIC2.49□□□□□ -2.01
ARHGEF39Q8N4T4 Y_RNA.629-201ENST00000411368 105 ntBASIC2.49□□□□□ -2.01
ARHGEF39Q8N4T4 AL158823.1-201ENST00000418441 478 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 206.5 ms