Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.64□□□□□ -1.99
ATXN1P54253 AC025166.1-201ENST00000612411 163 ntBASIC2.64□□□□□ -1.99
ATXN1P54253 AL035470.1-201ENST00000622571 220 ntBASIC2.64□□□□□ -1.99
ATXN1P54253 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.64□□□□□ -1.99
ATXN1P54253 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.64□□□□□ -1.99
ATXN1P54253 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
ATXN1P54253 Y_RNA.85-201ENST00000363014 111 ntBASIC2.63□□□□□ -1.99
ATXN1P54253 MIR27B-201ENST00000385129 97 ntBASIC2.63□□□□□ -1.99
ATXN1P54253 RNU6-788P-201ENST00000390967 104 ntBASIC2.63□□□□□ -1.99
ATXN1P54253 RNU6-1228P-201ENST00000391014 107 ntBASIC2.63□□□□□ -1.99
ATXN1P54253 MIR1294-201ENST00000408503 142 ntBASIC2.63□□□□□ -1.99
ATXN1P54253 RNU6-383P-201ENST00000410864 94 ntBASIC2.63□□□□□ -1.99
ATXN1P54253 AC022137.1-201ENST00000483735 151 ntBASIC2.63□□□□□ -1.99
ATXN1P54253 RNU5F-4P-201ENST00000516581 114 ntBASIC2.63□□□□□ -1.99
ATXN1P54253 Y_RNA.692-201ENST00000516627 105 ntBASIC2.63□□□□□ -1.99
ATXN1P54253 RNU6-107P-201ENST00000516643 102 ntBASIC2.63□□□□□ -1.99
ATXN1P54253 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.63□□□□□ -1.99
ATXN1P54253 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.63□□□□□ -1.99
ATXN1P54253 POLR3GP1-201ENST00000594073 261 ntBASIC2.63□□□□□ -1.99
ATXN1P54253 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.63□□□□□ -1.99
ATXN1P54253 MALAT1.1-201ENST00000618249 95 ntBASIC2.63□□□□□ -1.99
ATXN1P54253 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.63□□□□□ -1.99
ATXN1P54253 AC068205.3-201ENST00000636385 468 ntBASIC2.63□□□□□ -1.99
ATXN1P54253 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ATXN1P54253 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ATXN1P54253 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
ATXN1P54253 RNU6-944P-201ENST00000364023 107 ntBASIC2.62□□□□□ -1.99
ATXN1P54253 Y_RNA.313-201ENST00000365095 103 ntBASIC2.62□□□□□ -1.99
ATXN1P54253 RNU6-497P-201ENST00000365316 104 ntBASIC2.62□□□□□ -1.99
ATXN1P54253 RNU6-1296P-201ENST00000383879 107 ntBASIC2.62□□□□□ -1.99
ATXN1P54253 Y_RNA.508-201ENST00000384502 114 ntBASIC2.62□□□□□ -1.99
ATXN1P54253 MIR518C-201ENST00000384822 101 ntBASIC2.62□□□□□ -1.99
ATXN1P54253 SNORD12C-201ENST00000386307 89 ntBASIC2.62□□□□□ -1.99
ATXN1P54253 Y_RNA.622-201ENST00000411091 108 ntBASIC2.62□□□□□ -1.99
ATXN1P54253 AL353689.1-201ENST00000438895 199 ntBASIC2.62□□□□□ -1.99
ATXN1P54253 AC026421.1-201ENST00000519101 163 ntBASIC2.62□□□□□ -1.99
ATXN1P54253 MIR4446-201ENST00000578505 67 ntBASIC2.62□□□□□ -1.99
ATXN1P54253 AC091178.2-201ENST00000584401 117 ntBASIC2.62□□□□□ -1.99
ATXN1P54253 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.62□□□□□ -1.99
ATXN1P54253 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
ATXN1P54253 AL159152.1-201ENST00000635019 2587 ntBASIC2.61□□□□□ -1.99
ATXN1P54253 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ATXN1P54253 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ATXN1P54253 AC131280.1-202ENST00000624067 4211 ntBASIC2.61□□□□□ -1.99
ATXN1P54253 Y_RNA.17-201ENST00000362433 111 ntBASIC2.61□□□□□ -1.99
ATXN1P54253 RNU6-454P-201ENST00000364292 107 ntBASIC2.61□□□□□ -1.99
ATXN1P54253 SNORD87-201ENST00000364849 89 ntBASIC2.61□□□□□ -1.99
ATXN1P54253 Y_RNA.342-201ENST00000365352 113 ntBASIC2.61□□□□□ -1.99
ATXN1P54253 RNY3P5-201ENST00000384127 102 ntBASIC2.61□□□□□ -1.99
ATXN1P54253 RNU6-1310P-201ENST00000384153 107 ntBASIC2.61□□□□□ -1.99
ATXN1P54253 AL356320.1-201ENST00000429616 163 ntBASIC2.61□□□□□ -1.99
ATXN1P54253 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
ATXN1P54253 PGBD4P5-201ENST00000445958 426 ntBASIC2.61□□□□□ -1.99
ATXN1P54253 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.61□□□□□ -1.99
ATXN1P54253 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ATXN1P54253 MIR449C-201ENST00000516047 92 ntBASIC2.61□□□□□ -1.99
ATXN1P54253 RNU6-1098P-201ENST00000516772 96 ntBASIC2.61□□□□□ -1.99
ATXN1P54253 RNU6-826P-201ENST00000516827 104 ntBASIC2.61□□□□□ -1.99
ATXN1P54253 MIR3126-201ENST00000577443 74 ntBASIC2.61□□□□□ -1.99
ATXN1P54253 AC245884.12-201ENST00000615364 59 ntBASIC2.61□□□□□ -1.99
ATXN1P54253 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ATXN1P54253 ZNF271P-202ENST00000465539 1970 ntBASIC2.6□□□□□ -1.99
ATXN1P54253 Y_RNA.140-201ENST00000363474 103 ntBASIC2.6□□□□□ -1.99
ATXN1P54253 RNU6-1134P-201ENST00000365156 101 ntBASIC2.6□□□□□ -1.99
ATXN1P54253 RNU6-1014P-201ENST00000383940 103 ntBASIC2.6□□□□□ -1.99
ATXN1P54253 RNU1-148P-201ENST00000384472 162 ntBASIC2.6□□□□□ -1.99
ATXN1P54253 RNA5SP475-201ENST00000410568 110 ntBASIC2.6□□□□□ -1.99
ATXN1P54253 RNA5SP504-201ENST00000410676 117 ntBASIC2.6□□□□□ -1.99
ATXN1P54253 RPS3AP1-201ENST00000413190 320 ntBASIC2.6□□□□□ -1.99
ATXN1P54253 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.6□□□□□ -1.99
ATXN1P54253 RPL39P34-201ENST00000477141 156 ntBASIC2.6□□□□□ -1.99
ATXN1P54253 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.6□□□□□ -1.99
ATXN1P54253 SNORA31.15-201ENST00000516771 132 ntBASIC2.6□□□□□ -1.99
ATXN1P54253 RNA5SP490-201ENST00000517141 136 ntBASIC2.6□□□□□ -1.99
ATXN1P54253 AC090142.3-201ENST00000519012 385 ntBASIC2.6□□□□□ -1.99
ATXN1P54253 AC136628.3-201ENST00000521868 290 ntBASIC2.6□□□□□ -1.99
ATXN1P54253 AC007012.1-201ENST00000567192 175 ntBASIC2.6□□□□□ -1.99
ATXN1P54253 SNORD115-40-201ENST00000606510 82 ntBASIC2.6□□□□□ -1.99
ATXN1P54253 FO624990.1-201ENST00000636373 85 ntBASIC2.6□□□□□ -1.99
ATXN1P54253 MIR3674-201ENST00000636576 68 ntBASIC2.6□□□□□ -1.99
ATXN1P54253 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
ATXN1P54253 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
ATXN1P54253 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
ATXN1P54253 SNORA3A-201ENST00000364113 130 ntBASIC2.59□□□□□ -1.99
ATXN1P54253 Y_RNA.220-201ENST00000364244 109 ntBASIC2.59□□□□□ -1.99
ATXN1P54253 RNU6-1264P-201ENST00000383891 107 ntBASIC2.59□□□□□ -1.99
ATXN1P54253 SNORA72.4-201ENST00000384174 132 ntBASIC2.59□□□□□ -1.99
ATXN1P54253 MIR889-201ENST00000401280 79 ntBASIC2.59□□□□□ -1.99
ATXN1P54253 MIR1263-201ENST00000408324 86 ntBASIC2.59□□□□□ -1.99
ATXN1P54253 U3.40-201ENST00000408706 208 ntBASIC2.59□□□□□ -1.99
ATXN1P54253 MTATP8P2-201ENST00000435212 202 ntBASIC2.59□□□□□ -1.99
ATXN1P54253 SNRPGP8-201ENST00000454064 226 ntBASIC2.59□□□□□ -1.99
ATXN1P54253 RPL39P39-201ENST00000455840 151 ntBASIC2.59□□□□□ -1.99
ATXN1P54253 RNU6-970P-201ENST00000516312 107 ntBASIC2.59□□□□□ -1.99
ATXN1P54253 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.59□□□□□ -1.99
ATXN1P54253 AL391903.3-201ENST00000612158 163 ntBASIC2.59□□□□□ -1.99
ATXN1P54253 AL078604.3-201ENST00000615580 211 ntBASIC2.59□□□□□ -1.99
ATXN1P54253 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
ATXN1P54253 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.59□□□□□ -2
ATXN1P54253 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms