Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 Y_RNA.558-201ENST00000384685 113 ntBASIC3.15□□□□□ -1.91
HOXD8P13378 MIR548A2-201ENST00000384956 97 ntBASIC3.15□□□□□ -1.91
HOXD8P13378 AL138827.1-201ENST00000402666 306 ntBASIC3.15□□□□□ -1.91
HOXD8P13378 AL117342.1-201ENST00000404861 406 ntBASIC3.15□□□□□ -1.91
HOXD8P13378 RNA5SP21-201ENST00000410917 96 ntBASIC3.15□□□□□ -1.91
HOXD8P13378 AL353689.1-201ENST00000438895 199 ntBASIC3.15□□□□□ -1.91
HOXD8P13378 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.15□□□□□ -1.91
HOXD8P13378 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HOXD8P13378 AC134878.1-201ENST00000619901 243 ntBASIC3.15□□□□□ -1.91
HOXD8P13378 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.15□□□□□ -1.91
HOXD8P13378 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXD8P13378 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HOXD8P13378 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXD8P13378 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HOXD8P13378 SNORD73B-201ENST00000364394 72 ntBASIC3.14□□□□□ -1.91
HOXD8P13378 SNORD21-201ENST00000383953 95 ntBASIC3.14□□□□□ -1.91
HOXD8P13378 MIR522-201ENST00000385071 87 ntBASIC3.14□□□□□ -1.91
HOXD8P13378 FTH1P12-201ENST00000432137 551 ntBASIC3.14□□□□□ -1.91
HOXD8P13378 HMGN2P32-201ENST00000444648 269 ntBASIC3.14□□□□□ -1.91
HOXD8P13378 SNORD109B-201ENST00000458961 67 ntBASIC3.14□□□□□ -1.91
HOXD8P13378 SNORD109A-201ENST00000459128 67 ntBASIC3.14□□□□□ -1.91
HOXD8P13378 RPL39P34-201ENST00000477141 156 ntBASIC3.14□□□□□ -1.91
HOXD8P13378 SCARNA15-202ENST00000516881 127 ntBASIC3.14□□□□□ -1.91
HOXD8P13378 MIR4769-201ENST00000584126 77 ntBASIC3.14□□□□□ -1.91
HOXD8P13378 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.14□□□□□ -1.91
HOXD8P13378 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.14□□□□□ -1.91
HOXD8P13378 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXD8P13378 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
HOXD8P13378 SNORA33-201ENST00000363664 130 ntBASIC3.13□□□□□ -1.91
HOXD8P13378 RNU1-112P-201ENST00000364401 164 ntBASIC3.13□□□□□ -1.91
HOXD8P13378 Y_RNA.410-201ENST00000383992 113 ntBASIC3.13□□□□□ -1.91
HOXD8P13378 RNU6-160P-201ENST00000384591 107 ntBASIC3.13□□□□□ -1.91
HOXD8P13378 MIR515-2-201ENST00000384883 83 ntBASIC3.13□□□□□ -1.91
HOXD8P13378 MIR515-1-201ENST00000384884 83 ntBASIC3.13□□□□□ -1.91
HOXD8P13378 SNORA26.2-201ENST00000390922 122 ntBASIC3.13□□□□□ -1.91
HOXD8P13378 U8.17-201ENST00000391292 132 ntBASIC3.13□□□□□ -1.91
HOXD8P13378 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXD8P13378 RN7SKP43-201ENST00000516173 320 ntBASIC3.13□□□□□ -1.91
HOXD8P13378 RNA5SP380-201ENST00000517190 98 ntBASIC3.13□□□□□ -1.91
HOXD8P13378 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXD8P13378 MIR4435-1-201ENST00000582552 80 ntBASIC3.13□□□□□ -1.91
HOXD8P13378 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXD8P13378 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXD8P13378 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXD8P13378 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXD8P13378 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXD8P13378 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXD8P13378 U8.6-201ENST00000364939 135 ntBASIC3.12□□□□□ -1.91
HOXD8P13378 RNU6-294P-201ENST00000364999 102 ntBASIC3.12□□□□□ -1.91
HOXD8P13378 snoU2-30.1-201ENST00000365012 70 ntBASIC3.12□□□□□ -1.91
HOXD8P13378 RNU6-1113P-201ENST00000384348 107 ntBASIC3.12□□□□□ -1.91
HOXD8P13378 RNU2-48P-201ENST00000410694 191 ntBASIC3.12□□□□□ -1.91
HOXD8P13378 SRIP3-201ENST00000413200 219 ntBASIC3.12□□□□□ -1.91
HOXD8P13378 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.12□□□□□ -1.91
HOXD8P13378 TRBV12-1-201ENST00000479785 344 ntBASIC3.12□□□□□ -1.91
HOXD8P13378 RNY4P20-201ENST00000516678 93 ntBASIC3.12□□□□□ -1.91
HOXD8P13378 IGKV3-31-201ENST00000523109 329 ntBASIC3.12□□□□□ -1.91
HOXD8P13378 AC004486.1-201ENST00000546846 233 ntBASIC3.12□□□□□ -1.91
HOXD8P13378 AC021443.1-201ENST00000604478 211 ntBASIC3.12□□□□□ -1.91
HOXD8P13378 AL353149.1-201ENST00000610667 244 ntBASIC3.12□□□□□ -1.91
HOXD8P13378 MIR7843-201ENST00000622274 79 ntBASIC3.12□□□□□ -1.91
HOXD8P13378 AL035470.1-201ENST00000622571 220 ntBASIC3.12□□□□□ -1.91
HOXD8P13378 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXD8P13378 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
HOXD8P13378 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXD8P13378 RNY4P6-201ENST00000363667 96 ntBASIC3.11□□□□□ -1.91
HOXD8P13378 MIR181B1-201ENST00000385240 110 ntBASIC3.11□□□□□ -1.91
HOXD8P13378 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXD8P13378 UQCRHP3-201ENST00000451503 251 ntBASIC3.11□□□□□ -1.91
HOXD8P13378 RN7SL636P-201ENST00000497504 294 ntBASIC3.11□□□□□ -1.91
HOXD8P13378 RNA5SP281-201ENST00000516504 135 ntBASIC3.11□□□□□ -1.91
HOXD8P13378 RNU7-25P-201ENST00000516544 62 ntBASIC3.11□□□□□ -1.91
HOXD8P13378 AC245166.1-201ENST00000521012 253 ntBASIC3.11□□□□□ -1.91
HOXD8P13378 AC007536.1-201ENST00000533382 349 ntBASIC3.11□□□□□ -1.91
HOXD8P13378 MIR376A2-201ENST00000636782 80 ntBASIC3.11□□□□□ -1.91
HOXD8P13378 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
HOXD8P13378 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXD8P13378 FAM35CP-201ENST00000554755 2470 ntBASIC3.11□□□□□ -1.91
HOXD8P13378 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXD8P13378 RNU6-859P-201ENST00000362728 107 ntBASIC3.1□□□□□ -1.91
HOXD8P13378 Y_RNA.99-201ENST00000363138 105 ntBASIC3.1□□□□□ -1.91
HOXD8P13378 SNORD115-28-201ENST00000363931 81 ntBASIC3.1□□□□□ -1.91
HOXD8P13378 Y_RNA.198-201ENST00000364013 98 ntBASIC3.1□□□□□ -1.91
HOXD8P13378 Y_RNA.328-201ENST00000365208 113 ntBASIC3.1□□□□□ -1.91
HOXD8P13378 RNU6-1014P-201ENST00000383940 103 ntBASIC3.1□□□□□ -1.91
HOXD8P13378 RPS3AP1-201ENST00000413190 320 ntBASIC3.1□□□□□ -1.91
HOXD8P13378 UBL5P3-201ENST00000475112 231 ntBASIC3.1□□□□□ -1.91
HOXD8P13378 RNU6-970P-201ENST00000516312 107 ntBASIC3.1□□□□□ -1.91
HOXD8P13378 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXD8P13378 AP003327.1-201ENST00000529684 127 ntBASIC3.1□□□□□ -1.91
HOXD8P13378 U6.108-201ENST00000637764 58 ntBASIC3.1□□□□□ -1.91
HOXD8P13378 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HOXD8P13378 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXD8P13378 MAPK10-322ENST00000641485 4530 ntBASIC3.09□□□□□ -1.91
HOXD8P13378 Y_RNA.265-201ENST00000364677 108 ntBASIC3.09□□□□□ -1.91
HOXD8P13378 RNU1-133P-201ENST00000364867 167 ntBASIC3.09□□□□□ -1.91
HOXD8P13378 SNORA25B-201ENST00000365507 128 ntBASIC3.09□□□□□ -1.91
HOXD8P13378 MIR512-1-201ENST00000384913 84 ntBASIC3.09□□□□□ -1.91
HOXD8P13378 RNU6-220P-201ENST00000390919 107 ntBASIC3.09□□□□□ -1.91
HOXD8P13378 RPL21P3-201ENST00000395517 478 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms