Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SNORA2.2-201ENST00000365473 135 ntBASIC2.98□□□□□ -1.93
PDGFAP04085 U8.9-201ENST00000365667 134 ntBASIC2.98□□□□□ -1.93
PDGFAP04085 Y_RNA.547-201ENST00000384654 119 ntBASIC2.98□□□□□ -1.93
PDGFAP04085 RNA5SP136-201ENST00000410906 107 ntBASIC2.98□□□□□ -1.93
PDGFAP04085 AL445646.1-201ENST00000431784 216 ntBASIC2.98□□□□□ -1.93
PDGFAP04085 IGKV1-22-201ENST00000524313 326 ntBASIC2.98□□□□□ -1.93
PDGFAP04085 UBL5P2-201ENST00000583788 219 ntBASIC2.98□□□□□ -1.93
PDGFAP04085 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.98□□□□□ -1.93
PDGFAP04085 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.98□□□□□ -1.93
PDGFAP04085 AC022149.2-201ENST00000621061 203 ntBASIC2.98□□□□□ -1.93
PDGFAP04085 MIR376A2-201ENST00000636782 80 ntBASIC2.98□□□□□ -1.93
PDGFAP04085 MAPK10-266ENST00000641066 6555 ntBASIC2.97□□□□□ -1.93
PDGFAP04085 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.97□□□□□ -1.93
PDGFAP04085 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PDGFAP04085 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.97□□□□□ -1.93
PDGFAP04085 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PDGFAP04085 Y_RNA.35-201ENST00000362601 101 ntBASIC2.97□□□□□ -1.93
PDGFAP04085 Y_RNA.37-201ENST00000362606 108 ntBASIC2.97□□□□□ -1.93
PDGFAP04085 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
PDGFAP04085 RNU7-70P-201ENST00000516941 66 ntBASIC2.97□□□□□ -1.93
PDGFAP04085 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.97□□□□□ -1.93
PDGFAP04085 MIR5094-201ENST00000578766 85 ntBASIC2.97□□□□□ -1.93
PDGFAP04085 RPL12P50-201ENST00000603116 116 ntBASIC2.97□□□□□ -1.93
PDGFAP04085 AL137067.1-201ENST00000615933 120 ntBASIC2.97□□□□□ -1.93
PDGFAP04085 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.97□□□□□ -1.93
PDGFAP04085 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.97□□□□□ -1.93
PDGFAP04085 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.96□□□□□ -1.93
PDGFAP04085 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
PDGFAP04085 RNU6-163P-201ENST00000384396 106 ntBASIC2.96□□□□□ -1.94
PDGFAP04085 Y_RNA.528-201ENST00000384575 108 ntBASIC2.96□□□□□ -1.94
PDGFAP04085 RNU6-950P-201ENST00000384651 107 ntBASIC2.96□□□□□ -1.94
PDGFAP04085 MIR548A1-201ENST00000385041 97 ntBASIC2.96□□□□□ -1.94
PDGFAP04085 RNU6-56P-201ENST00000516986 93 ntBASIC2.96□□□□□ -1.94
PDGFAP04085 MIR2682-201ENST00000580305 110 ntBASIC2.96□□□□□ -1.94
PDGFAP04085 AC015726.2-201ENST00000620112 122 ntBASIC2.96□□□□□ -1.94
PDGFAP04085 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PDGFAP04085 ICE2P2-201ENST00000483823 2787 ntBASIC2.96□□□□□ -1.94
PDGFAP04085 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PDGFAP04085 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PDGFAP04085 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.96□□□□□ -1.94
PDGFAP04085 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PDGFAP04085 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
PDGFAP04085 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PDGFAP04085 RNA5SP126-201ENST00000365092 109 ntBASIC2.95□□□□□ -1.94
PDGFAP04085 SNORD38C-201ENST00000384381 69 ntBASIC2.95□□□□□ -1.94
PDGFAP04085 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PDGFAP04085 RNU11-3P-201ENST00000391111 133 ntBASIC2.95□□□□□ -1.94
PDGFAP04085 RN7SKP200-201ENST00000410564 320 ntBASIC2.95□□□□□ -1.94
PDGFAP04085 AC087499.4-201ENST00000448505 178 ntBASIC2.95□□□□□ -1.94
PDGFAP04085 RN7SL75P-201ENST00000461926 281 ntBASIC2.95□□□□□ -1.94
PDGFAP04085 RPS26P48-201ENST00000491713 339 ntBASIC2.95□□□□□ -1.94
PDGFAP04085 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.95□□□□□ -1.94
PDGFAP04085 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PDGFAP04085 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PDGFAP04085 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
PDGFAP04085 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PDGFAP04085 Y_RNA.366-201ENST00000365540 102 ntBASIC2.94□□□□□ -1.94
PDGFAP04085 RNU6-301P-201ENST00000384277 107 ntBASIC2.94□□□□□ -1.94
PDGFAP04085 SNORA54-201ENST00000384281 123 ntBASIC2.94□□□□□ -1.94
PDGFAP04085 AC114811.1-201ENST00000507207 168 ntBASIC2.94□□□□□ -1.94
PDGFAP04085 AC073476.4-201ENST00000628409 72 ntBASIC2.94□□□□□ -1.94
PDGFAP04085 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PDGFAP04085 ZNF720P1-201ENST00000562403 1939 ntBASIC2.93□□□□□ -1.94
PDGFAP04085 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
PDGFAP04085 MIR449A-201ENST00000362113 91 ntBASIC2.93□□□□□ -1.94
PDGFAP04085 SNORA7.4-201ENST00000384249 137 ntBASIC2.93□□□□□ -1.94
PDGFAP04085 MIR597-201ENST00000384968 97 ntBASIC2.93□□□□□ -1.94
PDGFAP04085 RNA5SP465-201ENST00000391195 109 ntBASIC2.93□□□□□ -1.94
PDGFAP04085 CALM2P4-201ENST00000430810 426 ntBASIC2.93□□□□□ -1.94
PDGFAP04085 RN7SL499P-201ENST00000481141 276 ntBASIC2.93□□□□□ -1.94
PDGFAP04085 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.93□□□□□ -1.94
PDGFAP04085 AC027279.3-201ENST00000625055 122 ntBASIC2.93□□□□□ -1.94
PDGFAP04085 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PDGFAP04085 AL034345.1-201ENST00000407768 123 ntBASIC2.92□□□□□ -1.94
PDGFAP04085 RNA5SP229-201ENST00000410809 99 ntBASIC2.92□□□□□ -1.94
PDGFAP04085 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.92□□□□□ -1.94
PDGFAP04085 COX6CP6-201ENST00000490840 228 ntBASIC2.92□□□□□ -1.94
PDGFAP04085 RNU6-240P-201ENST00000516098 97 ntBASIC2.92□□□□□ -1.94
PDGFAP04085 SNORD36C-201ENST00000516733 66 ntBASIC2.92□□□□□ -1.94
PDGFAP04085 SNORA18.7-201ENST00000516910 131 ntBASIC2.92□□□□□ -1.94
PDGFAP04085 AP003484.1-201ENST00000530974 250 ntBASIC2.92□□□□□ -1.94
PDGFAP04085 uc_338.1-201ENST00000612113 180 ntBASIC2.92□□□□□ -1.94
PDGFAP04085 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PDGFAP04085 RNU6-690P-201ENST00000365242 106 ntBASIC2.91□□□□□ -1.94
PDGFAP04085 Y_RNA.440-201ENST00000384120 114 ntBASIC2.91□□□□□ -1.94
PDGFAP04085 MIR570-201ENST00000384917 97 ntBASIC2.91□□□□□ -1.94
PDGFAP04085 RNU6-412P-201ENST00000516434 106 ntBASIC2.91□□□□□ -1.94
PDGFAP04085 SNORA31.10-201ENST00000516482 106 ntBASIC2.91□□□□□ -1.94
PDGFAP04085 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.91□□□□□ -1.94
PDGFAP04085 uc_338.25-201ENST00000613756 156 ntBASIC2.91□□□□□ -1.94
PDGFAP04085 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
PDGFAP04085 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PDGFAP04085 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
PDGFAP04085 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.9□□□□□ -1.94
PDGFAP04085 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.95
PDGFAP04085 RNU1-133P-201ENST00000364867 167 ntBASIC2.9□□□□□ -1.95
PDGFAP04085 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.9□□□□□ -1.95
PDGFAP04085 RNU7-80P-201ENST00000459562 61 ntBASIC2.9□□□□□ -1.95
PDGFAP04085 RNA5SP356-201ENST00000515972 94 ntBASIC2.9□□□□□ -1.95
PDGFAP04085 RPPH1-2P-201ENST00000516688 293 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms