Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
GFRA3O60609 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
GFRA3O60609 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
GFRA3O60609 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
GFRA3O60609 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
GFRA3O60609 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
GFRA3O60609 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.56□□□□□ -1.84
GFRA3O60609 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.56□□□□□ -1.84
GFRA3O60609 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.56□□□□□ -1.84
GFRA3O60609 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
GFRA3O60609 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
GFRA3O60609 snoU2-30.2-201ENST00000362805 70 ntBASIC3.56□□□□□ -1.84
GFRA3O60609 SNORD17-201ENST00000390930 237 ntBASIC3.56□□□□□ -1.84
GFRA3O60609 HLA-N-201ENST00000437516 135 ntBASIC3.56□□□□□ -1.84
GFRA3O60609 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.56□□□□□ -1.84
GFRA3O60609 IFNWP4-201ENST00000453148 294 ntBASIC3.56□□□□□ -1.84
GFRA3O60609 RNU7-181P-201ENST00000517234 74 ntBASIC3.56□□□□□ -1.84
GFRA3O60609 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.56□□□□□ -1.84
GFRA3O60609 CYP4A43P-201ENST00000568156 121 ntBASIC3.56□□□□□ -1.84
GFRA3O60609 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.56□□□□□ -1.84
GFRA3O60609 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
GFRA3O60609 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.56□□□□□ -1.84
GFRA3O60609 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
GFRA3O60609 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
GFRA3O60609 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GFRA3O60609 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
GFRA3O60609 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
GFRA3O60609 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GFRA3O60609 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
GFRA3O60609 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
GFRA3O60609 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
GFRA3O60609 MIR340-201ENST00000362125 95 ntBASIC3.55□□□□□ -1.84
GFRA3O60609 Y_RNA.12-201ENST00000362393 112 ntBASIC3.55□□□□□ -1.84
GFRA3O60609 RNU6-808P-201ENST00000391233 108 ntBASIC3.55□□□□□ -1.84
GFRA3O60609 MIR942-201ENST00000401111 86 ntBASIC3.55□□□□□ -1.84
GFRA3O60609 AC097463.2-201ENST00000421074 142 ntBASIC3.55□□□□□ -1.84
GFRA3O60609 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.55□□□□□ -1.84
GFRA3O60609 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.55□□□□□ -1.84
GFRA3O60609 snoU13.28-201ENST00000459235 104 ntBASIC3.55□□□□□ -1.84
GFRA3O60609 SNORA4.4-201ENST00000515921 135 ntBASIC3.55□□□□□ -1.84
GFRA3O60609 YWHAEP2-201ENST00000580066 112 ntBASIC3.55□□□□□ -1.84
GFRA3O60609 YWHAEP3-201ENST00000582767 121 ntBASIC3.55□□□□□ -1.84
GFRA3O60609 SNORA62.6-201ENST00000606322 83 ntBASIC3.55□□□□□ -1.84
GFRA3O60609 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GFRA3O60609 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
GFRA3O60609 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GFRA3O60609 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GFRA3O60609 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
GFRA3O60609 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
GFRA3O60609 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
GFRA3O60609 RNU6-811P-201ENST00000384069 107 ntBASIC3.54□□□□□ -1.84
GFRA3O60609 RNU6-160P-201ENST00000384591 107 ntBASIC3.54□□□□□ -1.84
GFRA3O60609 TRBV12-1-201ENST00000479785 344 ntBASIC3.54□□□□□ -1.84
GFRA3O60609 MIR8066-201ENST00000617280 78 ntBASIC3.54□□□□□ -1.84
GFRA3O60609 AC105081.1-201ENST00000617727 106 ntBASIC3.54□□□□□ -1.84
GFRA3O60609 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
GFRA3O60609 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.54□□□□□ -1.84
GFRA3O60609 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GFRA3O60609 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GFRA3O60609 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.54□□□□□ -1.84
GFRA3O60609 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GFRA3O60609 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GFRA3O60609 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
GFRA3O60609 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
GFRA3O60609 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
GFRA3O60609 MIR448-201ENST00000362131 111 ntBASIC3.53□□□□□ -1.84
GFRA3O60609 RNU6-283P-201ENST00000364788 107 ntBASIC3.53□□□□□ -1.84
GFRA3O60609 CD24P4-201ENST00000382840 243 ntBASIC3.53□□□□□ -1.84
GFRA3O60609 SNORD116-24-201ENST00000384549 92 ntBASIC3.53□□□□□ -1.84
GFRA3O60609 MIR1267-201ENST00000408723 78 ntBASIC3.53□□□□□ -1.84
GFRA3O60609 RNA5SP261-201ENST00000410536 106 ntBASIC3.53□□□□□ -1.84
GFRA3O60609 DNAJC19P9-201ENST00000555084 351 ntBASIC3.53□□□□□ -1.84
GFRA3O60609 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.53□□□□□ -1.84
GFRA3O60609 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.53□□□□□ -1.84
GFRA3O60609 AL591424.2-201ENST00000617023 128 ntBASIC3.53□□□□□ -1.84
GFRA3O60609 AP000553.6-201ENST00000641242 118 ntBASIC3.53□□□□□ -1.84
GFRA3O60609 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
GFRA3O60609 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
GFRA3O60609 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
GFRA3O60609 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
GFRA3O60609 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
GFRA3O60609 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GFRA3O60609 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
GFRA3O60609 MIR93-201ENST00000385024 80 ntBASIC3.52□□□□□ -1.85
GFRA3O60609 RNU2-63P-201ENST00000410792 194 ntBASIC3.52□□□□□ -1.85
GFRA3O60609 RNU7-48P-201ENST00000458875 63 ntBASIC3.52□□□□□ -1.85
GFRA3O60609 AC025445.1-201ENST00000502728 300 ntBASIC3.52□□□□□ -1.85
GFRA3O60609 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.52□□□□□ -1.85
GFRA3O60609 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.52□□□□□ -1.85
GFRA3O60609 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC3.52□□□□□ -1.85
GFRA3O60609 uc_338.14-201ENST00000613162 166 ntBASIC3.52□□□□□ -1.85
GFRA3O60609 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
GFRA3O60609 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.52□□□□□ -1.85
GFRA3O60609 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.51□□□□□ -1.85
GFRA3O60609 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
GFRA3O60609 HSBP1P2-201ENST00000299671 229 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 MIR337-201ENST00000362281 93 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 Y_RNA.98-201ENST00000363109 102 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 RNU6-447P-201ENST00000410293 104 ntBASIC3.51□□□□□ -1.85
GFRA3O60609 RNU6-1118P-201ENST00000410382 104 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms