Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC6Q9Y625 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC6Q9Y625 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC6Q9Y625 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
GPC6Q9Y625 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC6Q9Y625 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC6Q9Y625 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.86■□□□□ 0.45
GPC6Q9Y625 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.86■□□□□ 0.45
GPC6Q9Y625 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GPC6Q9Y625 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
GPC6Q9Y625 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
GPC6Q9Y625 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GPC6Q9Y625 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GPC6Q9Y625 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC6Q9Y625 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC6Q9Y625 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.86■□□□□ 0.45
GPC6Q9Y625 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC6Q9Y625 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
GPC6Q9Y625 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
GPC6Q9Y625 AC012313.1-201ENST00000593393 3059 ntBASIC17.85■□□□□ 0.45
GPC6Q9Y625 AC018470.1-201ENST00000624790 3129 ntBASIC17.85■□□□□ 0.45
GPC6Q9Y625 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC6Q9Y625 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC6Q9Y625 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
GPC6Q9Y625 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
GPC6Q9Y625 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
GPC6Q9Y625 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC6Q9Y625 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.85■□□□□ 0.45
GPC6Q9Y625 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC6Q9Y625 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC6Q9Y625 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC6Q9Y625 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC6Q9Y625 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC6Q9Y625 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC6Q9Y625 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC6Q9Y625 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GPC6Q9Y625 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GPC6Q9Y625 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GPC6Q9Y625 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
GPC6Q9Y625 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.85■□□□□ 0.45
GPC6Q9Y625 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.85■□□□□ 0.45
GPC6Q9Y625 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GPC6Q9Y625 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.85■□□□□ 0.45
GPC6Q9Y625 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC6Q9Y625 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.85■□□□□ 0.45
GPC6Q9Y625 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
GPC6Q9Y625 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC6Q9Y625 MTDHP1-201ENST00000605323 784 ntBASIC17.85■□□□□ 0.45
GPC6Q9Y625 AL139384.1-201ENST00000612143 3047 ntBASIC17.85■□□□□ 0.45
GPC6Q9Y625 AC073648.6-201ENST00000641589 218 ntBASIC17.85■□□□□ 0.45
GPC6Q9Y625 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.85■□□□□ 0.45
GPC6Q9Y625 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GPC6Q9Y625 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GPC6Q9Y625 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
GPC6Q9Y625 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.84■□□□□ 0.45
GPC6Q9Y625 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 FP475955.4-201ENST00000623131 1990 ntBASIC17.84■□□□□ 0.45
GPC6Q9Y625 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 AC011270.2-201ENST00000624293 2550 ntBASIC17.84■□□□□ 0.45
GPC6Q9Y625 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 AC128676.1-201ENST00000454392 318 ntBASIC17.84■□□□□ 0.45
GPC6Q9Y625 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.84■□□□□ 0.45
GPC6Q9Y625 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.84■□□□□ 0.45
GPC6Q9Y625 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.84■□□□□ 0.45
GPC6Q9Y625 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 IRX1P1-201ENST00000438849 1838 ntBASIC17.84■□□□□ 0.45
GPC6Q9Y625 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GPC6Q9Y625 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
GPC6Q9Y625 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GPC6Q9Y625 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.83■□□□□ 0.45
GPC6Q9Y625 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.83■□□□□ 0.45
GPC6Q9Y625 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
GPC6Q9Y625 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
GPC6Q9Y625 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.83■□□□□ 0.45
GPC6Q9Y625 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.83■□□□□ 0.44
GPC6Q9Y625 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.83■□□□□ 0.44
GPC6Q9Y625 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GPC6Q9Y625 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.83■□□□□ 0.44
GPC6Q9Y625 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
GPC6Q9Y625 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
GPC6Q9Y625 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GPC6Q9Y625 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
GPC6Q9Y625 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.83■□□□□ 0.44
GPC6Q9Y625 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.83■□□□□ 0.44
GPC6Q9Y625 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms