Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 HMGA1P5-201ENST00000412453 271 ntBASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 CCR12P-201ENST00000446203 998 ntBASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 AC091076.1-201ENST00000610741 619 ntBASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB11Q9Y5F2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 MFAP1P1-201ENST00000442257 1255 ntBASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 AC008040.2-201ENST00000461049 708 ntBASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB11Q9Y5F2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 AC096733.2-201ENST00000609937 1394 ntBASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 AC022616.7-201ENST00000525383 220 ntBASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB11Q9Y5F2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 TEX21P-204ENST00000641479 1693 ntBASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms