Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 LINC01023-201ENST00000606054 436 ntBASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RABGEF1Q9UJ41 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 FEM1AP3-201ENST00000403722 1741 ntBASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 NBPF21P-201ENST00000425093 1451 ntBASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 YBX1P10-201ENST00000444752 975 ntBASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 AP006587.1-201ENST00000534129 1502 ntBASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 HTR7P1-201ENST00000538670 1336 ntBASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RABGEF1Q9UJ41 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 BICD1-207ENST00000551848 1962 ntBASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 AC087499.1-201ENST00000418141 1075 ntBASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 AF186192.3-201ENST00000583427 947 ntBASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RABGEF1Q9UJ41 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RABGEF1Q9UJ41 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.36■□□□□ 0.69
RABGEF1Q9UJ41 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RABGEF1Q9UJ41 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RABGEF1Q9UJ41 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.36■□□□□ 0.69
RABGEF1Q9UJ41 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RABGEF1Q9UJ41 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RABGEF1Q9UJ41 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RABGEF1Q9UJ41 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.36■□□□□ 0.69
RABGEF1Q9UJ41 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RABGEF1Q9UJ41 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RABGEF1Q9UJ41 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RABGEF1Q9UJ41 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RABGEF1Q9UJ41 FAM210CP-201ENST00000445714 574 ntBASIC19.36■□□□□ 0.69
RABGEF1Q9UJ41 KRT16P5-201ENST00000455284 522 ntBASIC19.36■□□□□ 0.69
RABGEF1Q9UJ41 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.36■□□□□ 0.69
RABGEF1Q9UJ41 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RABGEF1Q9UJ41 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms