Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 AP002414.4-201ENST00000589764 1148 ntBASIC19.62■□□□□ 0.73
HCFC1R1Q9NWW0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HCFC1R1Q9NWW0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HCFC1R1Q9NWW0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HCFC1R1Q9NWW0 AL512353.2-201ENST00000448759 1962 ntBASIC19.62■□□□□ 0.73
HCFC1R1Q9NWW0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HCFC1R1Q9NWW0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.62■□□□□ 0.73
HCFC1R1Q9NWW0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HCFC1R1Q9NWW0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HCFC1R1Q9NWW0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HCFC1R1Q9NWW0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 LINC01521-201ENST00000504184 1943 ntBASIC19.61■□□□□ 0.73
HCFC1R1Q9NWW0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 AC246785.2-201ENST00000432512 513 ntBASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 KRT18P23-201ENST00000435622 1283 ntBASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 KRT8P26-201ENST00000534154 1276 ntBASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 RNF126P1-202ENST00000569893 925 ntBASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HCFC1R1Q9NWW0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 AL109659.2-201ENST00000606809 1674 ntBASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 AC093525.10-201ENST00000625130 1569 ntBASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 RN7SL510P-201ENST00000581311 263 ntBASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HCFC1R1Q9NWW0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.58■□□□□ 0.73
HCFC1R1Q9NWW0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
HCFC1R1Q9NWW0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HCFC1R1Q9NWW0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
HCFC1R1Q9NWW0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HCFC1R1Q9NWW0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms