Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF216Q9NWF9 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF216Q9NWF9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF216Q9NWF9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RNF216Q9NWF9 AL031963.3-201ENST00000606441 850 ntBASIC21.71■■□□□ 1.07
RNF216Q9NWF9 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC21.71■■□□□ 1.07
RNF216Q9NWF9 AC084824.3-201ENST00000620472 856 ntBASIC21.71■■□□□ 1.07
RNF216Q9NWF9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF216Q9NWF9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF216Q9NWF9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF216Q9NWF9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
RNF216Q9NWF9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF216Q9NWF9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF216Q9NWF9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF216Q9NWF9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RNF216Q9NWF9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
RNF216Q9NWF9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF216Q9NWF9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF216Q9NWF9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
RNF216Q9NWF9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF216Q9NWF9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
RNF216Q9NWF9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF216Q9NWF9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF216Q9NWF9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF216Q9NWF9 AC116562.4-201ENST00000641316 2276 ntBASIC21.7■■□□□ 1.06
RNF216Q9NWF9 MMP23A-201ENST00000234610 1017 ntBASIC21.7■■□□□ 1.06
RNF216Q9NWF9 TMEM126A-201ENST00000304511 739 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF216Q9NWF9 POLR2K-201ENST00000353107 998 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF216Q9NWF9 MGST3-204ENST00000367888 778 ntTSL 3 BASIC21.7■■□□□ 1.06
RNF216Q9NWF9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF216Q9NWF9 FAM220BP-201ENST00000377689 816 ntBASIC21.7■■□□□ 1.06
RNF216Q9NWF9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF216Q9NWF9 BMS1P13-201ENST00000417301 885 ntBASIC21.7■■□□□ 1.06
RNF216Q9NWF9 BMS1P11-201ENST00000442351 885 ntBASIC21.7■■□□□ 1.06
RNF216Q9NWF9 ATP6AP2-204ENST00000447485 1254 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF216Q9NWF9 BMS1P9-201ENST00000457640 885 ntBASIC21.7■■□□□ 1.06
RNF216Q9NWF9 RNU6-362P-201ENST00000516736 90 ntBASIC21.7■■□□□ 1.06
RNF216Q9NWF9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.7■■□□□ 1.06
RNF216Q9NWF9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.7■■□□□ 1.06
RNF216Q9NWF9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF216Q9NWF9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF216Q9NWF9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF216Q9NWF9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
RNF216Q9NWF9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF216Q9NWF9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF216Q9NWF9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF216Q9NWF9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF216Q9NWF9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
RNF216Q9NWF9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF216Q9NWF9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF216Q9NWF9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF216Q9NWF9 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC21.69■■□□□ 1.06
RNF216Q9NWF9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RNF216Q9NWF9 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC21.69■■□□□ 1.06
RNF216Q9NWF9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
RNF216Q9NWF9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF216Q9NWF9 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF216Q9NWF9 AC136428.4-201ENST00000634254 1155 ntBASIC21.69■■□□□ 1.06
RNF216Q9NWF9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF216Q9NWF9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF216Q9NWF9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RNF216Q9NWF9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF216Q9NWF9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
RNF216Q9NWF9 LETM1P2-201ENST00000597330 2178 ntBASIC21.68■■□□□ 1.06
RNF216Q9NWF9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 RNU6-673P-201ENST00000365084 104 ntBASIC21.68■■□□□ 1.06
RNF216Q9NWF9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 UBE2V1P12-201ENST00000503954 474 ntBASIC21.68■■□□□ 1.06
RNF216Q9NWF9 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 AC090772.3-201ENST00000583267 735 ntTSL 3 BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 AC012306.2-201ENST00000609350 630 ntBASIC21.68■■□□□ 1.06
RNF216Q9NWF9 AC022306.2-201ENST00000617563 647 ntBASIC21.68■■□□□ 1.06
RNF216Q9NWF9 AC104820.1-201ENST00000624183 307 ntBASIC21.68■■□□□ 1.06
RNF216Q9NWF9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RNF216Q9NWF9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RNF216Q9NWF9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF216Q9NWF9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF216Q9NWF9 AC096656.1-201ENST00000623826 1364 ntBASIC21.67■■□□□ 1.06
RNF216Q9NWF9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF216Q9NWF9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF216Q9NWF9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF216Q9NWF9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF216Q9NWF9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF216Q9NWF9 ZNF92P1Y-201ENST00000415010 1191 ntBASIC21.67■■□□□ 1.06
RNF216Q9NWF9 RPS14P4-201ENST00000415880 418 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms