Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 AL512353.2-201ENST00000448759 1962 ntBASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 MTDHP1-201ENST00000605323 784 ntBASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIN7CQ9NUP9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LIN7CQ9NUP9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
LIN7CQ9NUP9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
LIN7CQ9NUP9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
LIN7CQ9NUP9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 AC135050.7-201ENST00000624508 2218 ntBASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 RN7SL471P-201ENST00000580476 299 ntBASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 TMEM191A-211ENST00000637163 1067 ntBASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 AL390961.4-201ENST00000623958 2535 ntBASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.7■□□□□ 0.1
LIN7CQ9NUP9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 AC239809.2-201ENST00000415381 517 ntBASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.69■□□□□ 0.1
LIN7CQ9NUP9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms