Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 AP001412.1-201ENST00000608405 714 ntBASIC18.85■□□□□ 0.61
TREX1Q9NSU2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 Z99916.2-201ENST00000604037 246 ntBASIC18.84■□□□□ 0.61
TREX1Q9NSU2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TREX1Q9NSU2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TREX1Q9NSU2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.83■□□□□ 0.61
TREX1Q9NSU2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.83■□□□□ 0.61
TREX1Q9NSU2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.83■□□□□ 0.61
TREX1Q9NSU2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TREX1Q9NSU2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TREX1Q9NSU2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TREX1Q9NSU2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.83■□□□□ 0.61
TREX1Q9NSU2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TREX1Q9NSU2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TREX1Q9NSU2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
TREX1Q9NSU2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TREX1Q9NSU2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.83■□□□□ 0.6
TREX1Q9NSU2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.83■□□□□ 0.6
TREX1Q9NSU2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TREX1Q9NSU2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TREX1Q9NSU2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.83■□□□□ 0.6
TREX1Q9NSU2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.83■□□□□ 0.6
TREX1Q9NSU2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.83■□□□□ 0.6
TREX1Q9NSU2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.83■□□□□ 0.6
TREX1Q9NSU2 REXO1L10P-201ENST00000615707 1290 ntBASIC18.83■□□□□ 0.6
TREX1Q9NSU2 REXO1L12P-201ENST00000622156 912 ntBASIC18.83■□□□□ 0.6
TREX1Q9NSU2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TREX1Q9NSU2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TREX1Q9NSU2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TREX1Q9NSU2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TREX1Q9NSU2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TREX1Q9NSU2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.83■□□□□ 0.6
TREX1Q9NSU2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms