Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 KRT18P22-201ENST00000402024 1347 ntBASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRDM9Q9NQV7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 ECEL1P3-201ENST00000427961 737 ntBASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 TSPY17P-201ENST00000450329 467 ntBASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 AP000974.1-201ENST00000623909 2387 ntBASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 AC006333.2-201ENST00000607957 2099 ntBASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRDM9Q9NQV7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRDM9Q9NQV7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRDM9Q9NQV7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
PRDM9Q9NQV7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PRDM9Q9NQV7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRDM9Q9NQV7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.83■□□□□ 0.45
PRDM9Q9NQV7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PRDM9Q9NQV7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRDM9Q9NQV7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PRDM9Q9NQV7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
PRDM9Q9NQV7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PRDM9Q9NQV7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRDM9Q9NQV7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRDM9Q9NQV7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRDM9Q9NQV7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRDM9Q9NQV7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.83■□□□□ 0.44
PRDM9Q9NQV7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.83■□□□□ 0.44
PRDM9Q9NQV7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.83■□□□□ 0.44
PRDM9Q9NQV7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.83■□□□□ 0.44
PRDM9Q9NQV7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.83■□□□□ 0.44
PRDM9Q9NQV7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PRDM9Q9NQV7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRDM9Q9NQV7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRDM9Q9NQV7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRDM9Q9NQV7 AL049812.1-201ENST00000432563 2267 ntBASIC17.83■□□□□ 0.44
PRDM9Q9NQV7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.83■□□□□ 0.44
PRDM9Q9NQV7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PRDM9Q9NQV7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 TNXA-203ENST00000507684 2038 ntBASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 AL023803.3-201ENST00000615559 522 ntBASIC17.82■□□□□ 0.44
PRDM9Q9NQV7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms