Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRPM3Q9HCF6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRPM3Q9HCF6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRPM3Q9HCF6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
TRPM3Q9HCF6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
TRPM3Q9HCF6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
TRPM3Q9HCF6 AP001005.1-201ENST00000571755 1248 ntBASIC25.42■■□□□ 1.66
TRPM3Q9HCF6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC25.42■■□□□ 1.66
TRPM3Q9HCF6 AC005332.3-201ENST00000589904 676 ntBASIC25.42■■□□□ 1.66
TRPM3Q9HCF6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
TRPM3Q9HCF6 AL773604.1-201ENST00000617417 272 ntBASIC25.42■■□□□ 1.66
TRPM3Q9HCF6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC25.42■■□□□ 1.66
TRPM3Q9HCF6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRPM3Q9HCF6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRPM3Q9HCF6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TRPM3Q9HCF6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TRPM3Q9HCF6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC25.41■■□□□ 1.66
TRPM3Q9HCF6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
TRPM3Q9HCF6 BNIP3P18-201ENST00000593976 575 ntBASIC25.41■■□□□ 1.66
TRPM3Q9HCF6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
TRPM3Q9HCF6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC25.41■■□□□ 1.66
TRPM3Q9HCF6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC25.41■■□□□ 1.66
TRPM3Q9HCF6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TRPM3Q9HCF6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC25.41■■□□□ 1.66
TRPM3Q9HCF6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC25.41■■□□□ 1.66
TRPM3Q9HCF6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TRPM3Q9HCF6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC25.4■■□□□ 1.66
TRPM3Q9HCF6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.4■■□□□ 1.66
TRPM3Q9HCF6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRPM3Q9HCF6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TRPM3Q9HCF6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRPM3Q9HCF6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRPM3Q9HCF6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TRPM3Q9HCF6 MIR574-201ENST00000385209 96 ntBASIC25.4■■□□□ 1.66
TRPM3Q9HCF6 RN7SL606P-201ENST00000472779 293 ntBASIC25.4■■□□□ 1.66
TRPM3Q9HCF6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRPM3Q9HCF6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC25.4■■□□□ 1.66
TRPM3Q9HCF6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC25.4■■□□□ 1.66
TRPM3Q9HCF6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRPM3Q9HCF6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
TRPM3Q9HCF6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRPM3Q9HCF6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TRPM3Q9HCF6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TRPM3Q9HCF6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
TRPM3Q9HCF6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC25.39■■□□□ 1.66
TRPM3Q9HCF6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC25.39■■□□□ 1.66
TRPM3Q9HCF6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TRPM3Q9HCF6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
TRPM3Q9HCF6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TRPM3Q9HCF6 EMD-201ENST00000369835 966 ntTSL 3 BASIC25.39■■□□□ 1.65
TRPM3Q9HCF6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
TRPM3Q9HCF6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC25.39■■□□□ 1.65
TRPM3Q9HCF6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
TRPM3Q9HCF6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC25.39■■□□□ 1.65
TRPM3Q9HCF6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC25.39■■□□□ 1.65
TRPM3Q9HCF6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
TRPM3Q9HCF6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
TRPM3Q9HCF6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC25.39■■□□□ 1.65
TRPM3Q9HCF6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TRPM3Q9HCF6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRPM3Q9HCF6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC25.38■■□□□ 1.65
TRPM3Q9HCF6 LBX2-AS1-202ENST00000603175 2083 ntBASIC25.38■■□□□ 1.65
TRPM3Q9HCF6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC25.38■■□□□ 1.65
TRPM3Q9HCF6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TRPM3Q9HCF6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC25.38■■□□□ 1.65
TRPM3Q9HCF6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC25.38■■□□□ 1.65
TRPM3Q9HCF6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC25.38■■□□□ 1.65
TRPM3Q9HCF6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
TRPM3Q9HCF6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC25.38■■□□□ 1.65
TRPM3Q9HCF6 AC139530.3-201ENST00000620344 690 ntBASIC25.38■■□□□ 1.65
TRPM3Q9HCF6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC25.38■■□□□ 1.65
TRPM3Q9HCF6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC25.38■■□□□ 1.65
TRPM3Q9HCF6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC25.38■■□□□ 1.65
TRPM3Q9HCF6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
TRPM3Q9HCF6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TRPM3Q9HCF6 KRT89P-201ENST00000620027 1478 ntBASIC25.38■■□□□ 1.65
TRPM3Q9HCF6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC25.38■■□□□ 1.65
TRPM3Q9HCF6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRPM3Q9HCF6 AC018712.1-201ENST00000455767 687 ntBASIC25.37■■□□□ 1.65
TRPM3Q9HCF6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC25.37■■□□□ 1.65
TRPM3Q9HCF6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC25.37■■□□□ 1.65
TRPM3Q9HCF6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRPM3Q9HCF6 AC243591.1-201ENST00000452967 1364 ntBASIC25.37■■□□□ 1.65
TRPM3Q9HCF6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC25.37■■□□□ 1.65
TRPM3Q9HCF6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TRPM3Q9HCF6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRPM3Q9HCF6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TRPM3Q9HCF6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.37■■□□□ 1.65
TRPM3Q9HCF6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC25.37■■□□□ 1.65
TRPM3Q9HCF6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC25.37■■□□□ 1.65
TRPM3Q9HCF6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
TRPM3Q9HCF6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC25.37■■□□□ 1.65
TRPM3Q9HCF6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRPM3Q9HCF6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRPM3Q9HCF6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRPM3Q9HCF6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TRPM3Q9HCF6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC25.36■■□□□ 1.65
TRPM3Q9HCF6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC25.36■■□□□ 1.65
TRPM3Q9HCF6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC25.36■■□□□ 1.65
TRPM3Q9HCF6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms