Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PIF1Q9H611 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PIF1Q9H611 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PIF1Q9H611 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PIF1Q9H611 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PIF1Q9H611 AC079598.2-202ENST00000546624 1451 ntBASIC18.04■□□□□ 0.48
PIF1Q9H611 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PIF1Q9H611 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PIF1Q9H611 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.04■□□□□ 0.48
PIF1Q9H611 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.04■□□□□ 0.48
PIF1Q9H611 DUSP5P2-201ENST00000426873 1033 ntBASIC18.04■□□□□ 0.48
PIF1Q9H611 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.04■□□□□ 0.48
PIF1Q9H611 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PIF1Q9H611 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.04■□□□□ 0.48
PIF1Q9H611 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.04■□□□□ 0.48
PIF1Q9H611 AC104771.1-201ENST00000603335 964 ntBASIC18.04■□□□□ 0.48
PIF1Q9H611 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PIF1Q9H611 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PIF1Q9H611 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PIF1Q9H611 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PIF1Q9H611 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PIF1Q9H611 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PIF1Q9H611 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.04■□□□□ 0.48
PIF1Q9H611 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PIF1Q9H611 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PIF1Q9H611 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PIF1Q9H611 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.04■□□□□ 0.48
PIF1Q9H611 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
PIF1Q9H611 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.03■□□□□ 0.48
PIF1Q9H611 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PIF1Q9H611 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PIF1Q9H611 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PIF1Q9H611 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PIF1Q9H611 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.03■□□□□ 0.48
PIF1Q9H611 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PIF1Q9H611 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.03■□□□□ 0.48
PIF1Q9H611 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.03■□□□□ 0.48
PIF1Q9H611 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PIF1Q9H611 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
PIF1Q9H611 YBX1P10-201ENST00000444752 975 ntBASIC18.03■□□□□ 0.48
PIF1Q9H611 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.03■□□□□ 0.48
PIF1Q9H611 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.03■□□□□ 0.48
PIF1Q9H611 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.03■□□□□ 0.48
PIF1Q9H611 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.03■□□□□ 0.48
PIF1Q9H611 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.03■□□□□ 0.48
PIF1Q9H611 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.03■□□□□ 0.48
PIF1Q9H611 AC133041.1-202ENST00000642053 222 ntBASIC18.03■□□□□ 0.48
PIF1Q9H611 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PIF1Q9H611 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.03■□□□□ 0.48
PIF1Q9H611 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PIF1Q9H611 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PIF1Q9H611 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.03■□□□□ 0.48
PIF1Q9H611 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PIF1Q9H611 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PIF1Q9H611 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PIF1Q9H611 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.03■□□□□ 0.48
PIF1Q9H611 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.02■□□□□ 0.48
PIF1Q9H611 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.02■□□□□ 0.48
PIF1Q9H611 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PIF1Q9H611 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PIF1Q9H611 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PIF1Q9H611 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PIF1Q9H611 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
PIF1Q9H611 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PIF1Q9H611 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.02■□□□□ 0.48
PIF1Q9H611 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PIF1Q9H611 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.02■□□□□ 0.48
PIF1Q9H611 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PIF1Q9H611 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.02■□□□□ 0.48
PIF1Q9H611 NOC2LP1-202ENST00000452600 2235 ntBASIC18.02■□□□□ 0.48
PIF1Q9H611 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PIF1Q9H611 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.02■□□□□ 0.48
PIF1Q9H611 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PIF1Q9H611 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PIF1Q9H611 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PIF1Q9H611 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PIF1Q9H611 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.02■□□□□ 0.48
PIF1Q9H611 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PIF1Q9H611 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.02■□□□□ 0.48
PIF1Q9H611 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.02■□□□□ 0.48
PIF1Q9H611 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
PIF1Q9H611 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PIF1Q9H611 AC068880.1-201ENST00000507289 2297 ntBASIC18.02■□□□□ 0.47
PIF1Q9H611 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PIF1Q9H611 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
PIF1Q9H611 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
PIF1Q9H611 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PIF1Q9H611 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PIF1Q9H611 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PIF1Q9H611 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
PIF1Q9H611 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
PIF1Q9H611 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PIF1Q9H611 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PIF1Q9H611 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PIF1Q9H611 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PIF1Q9H611 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PIF1Q9H611 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PIF1Q9H611 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.01■□□□□ 0.47
PIF1Q9H611 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.01■□□□□ 0.47
PIF1Q9H611 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms