Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
VRK1Q99986 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VRK1Q99986 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VRK1Q99986 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VRK1Q99986 MMP23A-201ENST00000234610 1017 ntBASIC16.67■□□□□ 0.26
VRK1Q99986 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.67■□□□□ 0.26
VRK1Q99986 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.67■□□□□ 0.26
VRK1Q99986 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.67■□□□□ 0.26
VRK1Q99986 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.67■□□□□ 0.26
VRK1Q99986 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.67■□□□□ 0.26
VRK1Q99986 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.67■□□□□ 0.26
VRK1Q99986 C1QL1P1-201ENST00000568105 661 ntBASIC16.67■□□□□ 0.26
VRK1Q99986 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
VRK1Q99986 REXO1L10P-201ENST00000615707 1290 ntBASIC16.67■□□□□ 0.26
VRK1Q99986 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.67■□□□□ 0.26
VRK1Q99986 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VRK1Q99986 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VRK1Q99986 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.67■□□□□ 0.26
VRK1Q99986 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.67■□□□□ 0.26
VRK1Q99986 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VRK1Q99986 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VRK1Q99986 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
VRK1Q99986 Z82202.1-201ENST00000623446 1880 ntBASIC16.67■□□□□ 0.26
VRK1Q99986 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.67■□□□□ 0.26
VRK1Q99986 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
VRK1Q99986 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.66■□□□□ 0.26
VRK1Q99986 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
VRK1Q99986 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
VRK1Q99986 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.66■□□□□ 0.26
VRK1Q99986 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.66■□□□□ 0.26
VRK1Q99986 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.66■□□□□ 0.26
VRK1Q99986 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.66■□□□□ 0.26
VRK1Q99986 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.66■□□□□ 0.26
VRK1Q99986 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 AL031985.4-201ENST00000642138 673 ntBASIC16.66■□□□□ 0.26
VRK1Q99986 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.66■□□□□ 0.26
VRK1Q99986 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
VRK1Q99986 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
VRK1Q99986 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VRK1Q99986 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK1Q99986 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.65■□□□□ 0.26
VRK1Q99986 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK1Q99986 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK1Q99986 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.65■□□□□ 0.26
VRK1Q99986 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK1Q99986 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK1Q99986 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.65■□□□□ 0.26
VRK1Q99986 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK1Q99986 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VRK1Q99986 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK1Q99986 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.65■□□□□ 0.26
VRK1Q99986 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.65■□□□□ 0.26
VRK1Q99986 RBM17P1-201ENST00000453646 1190 ntBASIC16.65■□□□□ 0.26
VRK1Q99986 KRT18P16-201ENST00000510337 1294 ntBASIC16.65■□□□□ 0.26
VRK1Q99986 KRT18P21-201ENST00000515767 1272 ntBASIC16.65■□□□□ 0.26
VRK1Q99986 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.65■□□□□ 0.26
VRK1Q99986 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.65■□□□□ 0.26
VRK1Q99986 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.65■□□□□ 0.26
VRK1Q99986 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.65■□□□□ 0.26
VRK1Q99986 AP000525.1-201ENST00000608286 694 ntBASIC16.65■□□□□ 0.26
VRK1Q99986 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.65■□□□□ 0.26
VRK1Q99986 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
VRK1Q99986 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VRK1Q99986 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK1Q99986 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK1Q99986 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK1Q99986 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK1Q99986 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.65■□□□□ 0.26
VRK1Q99986 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK1Q99986 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
VRK1Q99986 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VRK1Q99986 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.65■□□□□ 0.26
VRK1Q99986 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VRK1Q99986 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
VRK1Q99986 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
VRK1Q99986 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VRK1Q99986 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.64■□□□□ 0.25
VRK1Q99986 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
VRK1Q99986 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms