Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPENQ96T58 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.04■□□□□ 0.32
SPENQ96T58 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.04■□□□□ 0.32
SPENQ96T58 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPENQ96T58 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.04■□□□□ 0.32
SPENQ96T58 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPENQ96T58 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.04■□□□□ 0.32
SPENQ96T58 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
SPENQ96T58 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SPENQ96T58 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.04■□□□□ 0.32
SPENQ96T58 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.04■□□□□ 0.32
SPENQ96T58 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPENQ96T58 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPENQ96T58 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPENQ96T58 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.04■□□□□ 0.32
SPENQ96T58 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SPENQ96T58 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPENQ96T58 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPENQ96T58 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.03■□□□□ 0.32
SPENQ96T58 AL391807.1-203ENST00000604392 2365 ntBASIC17.03■□□□□ 0.32
SPENQ96T58 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPENQ96T58 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.03■□□□□ 0.32
SPENQ96T58 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPENQ96T58 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.03■□□□□ 0.32
SPENQ96T58 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SPENQ96T58 AC020907.5-201ENST00000624372 1936 ntBASIC17.03■□□□□ 0.32
SPENQ96T58 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPENQ96T58 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.03■□□□□ 0.32
SPENQ96T58 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPENQ96T58 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SPENQ96T58 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPENQ96T58 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
SPENQ96T58 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SPENQ96T58 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.03■□□□□ 0.32
SPENQ96T58 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.03■□□□□ 0.32
SPENQ96T58 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPENQ96T58 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPENQ96T58 FAAHP1-202ENST00000446499 1238 ntBASIC17.03■□□□□ 0.32
SPENQ96T58 BX640515.1-201ENST00000617215 977 ntBASIC17.03■□□□□ 0.32
SPENQ96T58 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPENQ96T58 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SPENQ96T58 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SPENQ96T58 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPENQ96T58 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SPENQ96T58 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SPENQ96T58 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.03■□□□□ 0.32
SPENQ96T58 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPENQ96T58 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SPENQ96T58 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SPENQ96T58 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.02■□□□□ 0.32
SPENQ96T58 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPENQ96T58 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SPENQ96T58 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.02■□□□□ 0.32
SPENQ96T58 AL353801.3-201ENST00000609898 542 ntBASIC17.02■□□□□ 0.32
SPENQ96T58 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
SPENQ96T58 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPENQ96T58 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPENQ96T58 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.02■□□□□ 0.32
SPENQ96T58 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.02■□□□□ 0.32
SPENQ96T58 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.02■□□□□ 0.32
SPENQ96T58 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SPENQ96T58 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SPENQ96T58 LINC00265-3P-201ENST00000447588 903 ntBASIC17.02■□□□□ 0.32
SPENQ96T58 AC091607.1-201ENST00000490318 1060 ntBASIC17.02■□□□□ 0.32
SPENQ96T58 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.02■□□□□ 0.32
SPENQ96T58 AL121672.3-201ENST00000608644 468 ntBASIC17.02■□□□□ 0.32
SPENQ96T58 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SPENQ96T58 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SPENQ96T58 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SPENQ96T58 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.02■□□□□ 0.31
SPENQ96T58 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
SPENQ96T58 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SPENQ96T58 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.02■□□□□ 0.31
SPENQ96T58 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SPENQ96T58 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.02■□□□□ 0.31
SPENQ96T58 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.02■□□□□ 0.31
SPENQ96T58 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.02■□□□□ 0.31
SPENQ96T58 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPENQ96T58 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.01■□□□□ 0.31
SPENQ96T58 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPENQ96T58 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPENQ96T58 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.01■□□□□ 0.31
SPENQ96T58 KRT8P26-201ENST00000534154 1276 ntBASIC17.01■□□□□ 0.31
SPENQ96T58 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SPENQ96T58 AC138894.3-201ENST00000603787 634 ntBASIC17.01■□□□□ 0.31
SPENQ96T58 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPENQ96T58 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPENQ96T58 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SPENQ96T58 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.01■□□□□ 0.31
SPENQ96T58 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SPENQ96T58 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
SPENQ96T58 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPENQ96T58 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.01■□□□□ 0.31
SPENQ96T58 MIR3917-201ENST00000580971 93 ntBASIC17.01■□□□□ 0.31
SPENQ96T58 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.01■□□□□ 0.31
SPENQ96T58 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.01■□□□□ 0.31
SPENQ96T58 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPENQ96T58 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SPENQ96T58 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPENQ96T58 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms