Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF558Q96NG5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF558Q96NG5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.05■□□□□ 0.8
ZNF558Q96NG5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF558Q96NG5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
ZNF558Q96NG5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ZNF558Q96NG5 AC246785.2-201ENST00000432512 513 ntBASIC20.05■□□□□ 0.8
ZNF558Q96NG5 NUS1P1-201ENST00000446295 882 ntBASIC20.05■□□□□ 0.8
ZNF558Q96NG5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.05■□□□□ 0.8
ZNF558Q96NG5 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.05■□□□□ 0.8
ZNF558Q96NG5 AC010240.3-201ENST00000607688 395 ntBASIC20.05■□□□□ 0.8
ZNF558Q96NG5 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.05■□□□□ 0.8
ZNF558Q96NG5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.05■□□□□ 0.8
ZNF558Q96NG5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ZNF558Q96NG5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF558Q96NG5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF558Q96NG5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.05■□□□□ 0.8
ZNF558Q96NG5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ZNF558Q96NG5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.05■□□□□ 0.8
ZNF558Q96NG5 AC008556.1-201ENST00000610908 2040 ntBASIC20.05■□□□□ 0.8
ZNF558Q96NG5 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF558Q96NG5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.05■□□□□ 0.8
ZNF558Q96NG5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.04■□□□□ 0.8
ZNF558Q96NG5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ZNF558Q96NG5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF558Q96NG5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF558Q96NG5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ZNF558Q96NG5 HOXB1-202ENST00000577092 1414 ntBASIC20.04■□□□□ 0.8
ZNF558Q96NG5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.04■□□□□ 0.8
ZNF558Q96NG5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF558Q96NG5 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF558Q96NG5 AL845331.1-201ENST00000424978 1190 ntBASIC20.04■□□□□ 0.8
ZNF558Q96NG5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF558Q96NG5 AC104390.1-201ENST00000555663 520 ntBASIC20.04■□□□□ 0.8
ZNF558Q96NG5 RNF126P1-202ENST00000569893 925 ntBASIC20.04■□□□□ 0.8
ZNF558Q96NG5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF558Q96NG5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.04■□□□□ 0.8
ZNF558Q96NG5 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
ZNF558Q96NG5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.04■□□□□ 0.8
ZNF558Q96NG5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
ZNF558Q96NG5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF558Q96NG5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ZNF558Q96NG5 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.04■□□□□ 0.8
ZNF558Q96NG5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF558Q96NG5 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ZNF558Q96NG5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 TEX21P-204ENST00000641479 1693 ntBASIC20.03■□□□□ 0.8
ZNF558Q96NG5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 AL157384.1-201ENST00000445995 2473 ntBASIC20.03■□□□□ 0.8
ZNF558Q96NG5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 FAAHP1-202ENST00000446499 1238 ntBASIC20.03■□□□□ 0.8
ZNF558Q96NG5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF558Q96NG5 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.02■□□□□ 0.8
ZNF558Q96NG5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 UNC93B7-201ENST00000509439 705 ntBASIC20.02■□□□□ 0.8
ZNF558Q96NG5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF558Q96NG5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms