Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SPG11Q96JI7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16■□□□□ 0.15
SPG11Q96JI7 AL512408.1-201ENST00000569378 2000 ntBASIC16■□□□□ 0.15
SPG11Q96JI7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SPG11Q96JI7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.99■□□□□ 0.15
SPG11Q96JI7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.99■□□□□ 0.15
SPG11Q96JI7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SPG11Q96JI7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.99■□□□□ 0.15
SPG11Q96JI7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SPG11Q96JI7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.99■□□□□ 0.15
SPG11Q96JI7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SPG11Q96JI7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.99■□□□□ 0.15
SPG11Q96JI7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.99■□□□□ 0.15
SPG11Q96JI7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.99■□□□□ 0.15
SPG11Q96JI7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SPG11Q96JI7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.99■□□□□ 0.15
SPG11Q96JI7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.99■□□□□ 0.15
SPG11Q96JI7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.99■□□□□ 0.15
SPG11Q96JI7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.99■□□□□ 0.15
SPG11Q96JI7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 AC243591.1-201ENST00000452967 1364 ntBASIC15.99■□□□□ 0.15
SPG11Q96JI7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SPG11Q96JI7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
SPG11Q96JI7 AC020763.4-201ENST00000623414 4170 ntBASIC15.98■□□□□ 0.15
SPG11Q96JI7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPG11Q96JI7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPG11Q96JI7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
SPG11Q96JI7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SPG11Q96JI7 FAM197Y8-203ENST00000450145 560 ntBASIC15.98■□□□□ 0.15
SPG11Q96JI7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.98■□□□□ 0.15
SPG11Q96JI7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.98■□□□□ 0.15
SPG11Q96JI7 AC079602.3-201ENST00000623931 403 ntBASIC15.98■□□□□ 0.15
SPG11Q96JI7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.98■□□□□ 0.15
SPG11Q96JI7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPG11Q96JI7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SPG11Q96JI7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPG11Q96JI7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPG11Q96JI7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
SPG11Q96JI7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.98■□□□□ 0.15
SPG11Q96JI7 AC099343.3-201ENST00000605834 2503 ntBASIC15.98■□□□□ 0.15
SPG11Q96JI7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPG11Q96JI7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SPG11Q96JI7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SPG11Q96JI7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPG11Q96JI7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.98■□□□□ 0.15
SPG11Q96JI7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPG11Q96JI7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.98■□□□□ 0.15
SPG11Q96JI7 BX842568.4-201ENST00000421222 227 ntBASIC15.98■□□□□ 0.15
SPG11Q96JI7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SPG11Q96JI7 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.98■□□□□ 0.15
SPG11Q96JI7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.98■□□□□ 0.15
SPG11Q96JI7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.98■□□□□ 0.15
SPG11Q96JI7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SPG11Q96JI7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPG11Q96JI7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SPG11Q96JI7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.97■□□□□ 0.15
SPG11Q96JI7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.97■□□□□ 0.15
SPG11Q96JI7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.97■□□□□ 0.15
SPG11Q96JI7 Z69720.1-201ENST00000601483 472 ntBASIC15.97■□□□□ 0.15
SPG11Q96JI7 AC027601.4-201ENST00000611259 610 ntBASIC15.97■□□□□ 0.15
SPG11Q96JI7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.97■□□□□ 0.15
SPG11Q96JI7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SPG11Q96JI7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.97■□□□□ 0.15
SPG11Q96JI7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.97■□□□□ 0.15
SPG11Q96JI7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SPG11Q96JI7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.97■□□□□ 0.15
SPG11Q96JI7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms