Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE2Q96FN4 AL049812.1-201ENST00000432563 2267 ntBASIC16.42■□□□□ 0.22
CPNE2Q96FN4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CPNE2Q96FN4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE2Q96FN4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE2Q96FN4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE2Q96FN4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.42■□□□□ 0.22
CPNE2Q96FN4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE2Q96FN4 AC004264.1-201ENST00000608354 794 ntBASIC16.42■□□□□ 0.22
CPNE2Q96FN4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.42■□□□□ 0.22
CPNE2Q96FN4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE2Q96FN4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE2Q96FN4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
CPNE2Q96FN4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CPNE2Q96FN4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE2Q96FN4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE2Q96FN4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE2Q96FN4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE2Q96FN4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CPNE2Q96FN4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE2Q96FN4 AC018470.1-201ENST00000624790 3129 ntBASIC16.41■□□□□ 0.22
CPNE2Q96FN4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CPNE2Q96FN4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.4■□□□□ 0.22
CPNE2Q96FN4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CPNE2Q96FN4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
CPNE2Q96FN4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE2Q96FN4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE2Q96FN4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.39■□□□□ 0.21
CPNE2Q96FN4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE2Q96FN4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CPNE2Q96FN4 AL031598.1-201ENST00000561511 1773 ntBASIC16.39■□□□□ 0.21
CPNE2Q96FN4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.39■□□□□ 0.21
CPNE2Q96FN4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE2Q96FN4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE2Q96FN4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE2Q96FN4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE2Q96FN4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CPNE2Q96FN4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE2Q96FN4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.39■□□□□ 0.21
CPNE2Q96FN4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.39■□□□□ 0.21
CPNE2Q96FN4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms