Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC243591.1-201ENST00000452967 1364 ntBASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 IGHGP-201ENST00000390555 1178 ntBASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 AC009065.1-201ENST00000564055 1225 ntBASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM43Q96BQ3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM43Q96BQ3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM43Q96BQ3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM43Q96BQ3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM43Q96BQ3 FAM220CP-201ENST00000395253 831 ntBASIC20.49■□□□□ 0.87
TRIM43Q96BQ3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM43Q96BQ3 KRT18P67-201ENST00000432816 1264 ntBASIC20.49■□□□□ 0.87
TRIM43Q96BQ3 RNPS1P1-201ENST00000507437 918 ntBASIC20.49■□□□□ 0.87
TRIM43Q96BQ3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TRIM43Q96BQ3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM43Q96BQ3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM43Q96BQ3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM43Q96BQ3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM43Q96BQ3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TRIM43Q96BQ3 PMS2P7-201ENST00000506558 1336 ntBASIC20.49■□□□□ 0.87
TRIM43Q96BQ3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM43Q96BQ3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM43Q96BQ3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TRIM43Q96BQ3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 KRT8P7-201ENST00000533003 1432 ntBASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 GUSBP12-201ENST00000513727 720 ntBASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 AC008556.1-201ENST00000610908 2040 ntBASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TRIM43Q96BQ3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 HOXB1-202ENST00000577092 1414 ntBASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 MIR940-201ENST00000401276 94 ntBASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 BX842568.4-201ENST00000421222 227 ntBASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 AL109659.2-201ENST00000606809 1674 ntBASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM43Q96BQ3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms