Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CNKSR1Q969H4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CNKSR1Q969H4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CNKSR1Q969H4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.13■■□□□ 1.29
CNKSR1Q969H4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CNKSR1Q969H4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CNKSR1Q969H4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CNKSR1Q969H4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CNKSR1Q969H4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.12■■□□□ 1.29
CNKSR1Q969H4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CNKSR1Q969H4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC23.12■■□□□ 1.29
CNKSR1Q969H4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CNKSR1Q969H4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CNKSR1Q969H4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CNKSR1Q969H4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC23.12■■□□□ 1.29
CNKSR1Q969H4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CNKSR1Q969H4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
CNKSR1Q969H4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC23.12■■□□□ 1.29
CNKSR1Q969H4 AC139530.3-201ENST00000620344 690 ntBASIC23.12■■□□□ 1.29
CNKSR1Q969H4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CNKSR1Q969H4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CNKSR1Q969H4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNKSR1Q969H4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNKSR1Q969H4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNKSR1Q969H4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CNKSR1Q969H4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNKSR1Q969H4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CNKSR1Q969H4 PMS2P1-201ENST00000431037 1228 ntBASIC23.11■■□□□ 1.29
CNKSR1Q969H4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC23.11■■□□□ 1.29
CNKSR1Q969H4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNKSR1Q969H4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
CNKSR1Q969H4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNKSR1Q969H4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CNKSR1Q969H4 REXO1L6P-202ENST00000619970 1078 ntBASIC23.11■■□□□ 1.29
CNKSR1Q969H4 NME4-212ENST00000621774 904 ntTSL 3 BASIC23.11■■□□□ 1.29
CNKSR1Q969H4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC23.11■■□□□ 1.29
CNKSR1Q969H4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CNKSR1Q969H4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNKSR1Q969H4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC23.11■■□□□ 1.29
CNKSR1Q969H4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CNKSR1Q969H4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CNKSR1Q969H4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNKSR1Q969H4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.11■■□□□ 1.29
CNKSR1Q969H4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CNKSR1Q969H4 AC008556.1-201ENST00000610908 2040 ntBASIC23.09■■□□□ 1.29
CNKSR1Q969H4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 RCC2P3-201ENST00000418112 1537 ntBASIC23.09■■□□□ 1.29
CNKSR1Q969H4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 GUSBP12-201ENST00000513727 720 ntBASIC23.09■■□□□ 1.29
CNKSR1Q969H4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 AL592071.1-201ENST00000611956 408 ntBASIC23.09■■□□□ 1.29
CNKSR1Q969H4 AF228730.7-201ENST00000641842 219 ntBASIC23.09■■□□□ 1.29
CNKSR1Q969H4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNKSR1Q969H4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms