Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.66■□□□□ 0.26
AP3S1Q92572 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.66■□□□□ 0.26
AP3S1Q92572 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S1Q92572 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S1Q92572 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S1Q92572 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S1Q92572 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.66■□□□□ 0.26
AP3S1Q92572 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.66■□□□□ 0.26
AP3S1Q92572 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S1Q92572 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S1Q92572 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S1Q92572 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3S1Q92572 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
AP3S1Q92572 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S1Q92572 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S1Q92572 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S1Q92572 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S1Q92572 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S1Q92572 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S1Q92572 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.65■□□□□ 0.26
AP3S1Q92572 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S1Q92572 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.65■□□□□ 0.26
AP3S1Q92572 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S1Q92572 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.65■□□□□ 0.26
AP3S1Q92572 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
AP3S1Q92572 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S1Q92572 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S1Q92572 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S1Q92572 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S1Q92572 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S1Q92572 AL162412.1-201ENST00000567129 965 ntBASIC16.65■□□□□ 0.26
AP3S1Q92572 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.65■□□□□ 0.26
AP3S1Q92572 MIR6084-201ENST00000622012 110 ntBASIC16.65■□□□□ 0.26
AP3S1Q92572 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.65■□□□□ 0.26
AP3S1Q92572 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S1Q92572 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S1Q92572 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S1Q92572 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S1Q92572 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.65■□□□□ 0.26
AP3S1Q92572 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S1Q92572 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.65■□□□□ 0.26
AP3S1Q92572 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
AP3S1Q92572 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
AP3S1Q92572 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
AP3S1Q92572 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S1Q92572 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S1Q92572 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S1Q92572 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S1Q92572 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S1Q92572 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
AP3S1Q92572 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S1Q92572 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
AP3S1Q92572 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S1Q92572 FER1L4-210ENST00000615531 5998 ntBASIC16.64■□□□□ 0.25
AP3S1Q92572 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.64■□□□□ 0.25
AP3S1Q92572 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.64■□□□□ 0.25
AP3S1Q92572 AC100791.3-201ENST00000617619 330 ntBASIC16.64■□□□□ 0.25
AP3S1Q92572 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
AP3S1Q92572 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S1Q92572 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S1Q92572 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S1Q92572 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S1Q92572 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.64■□□□□ 0.25
AP3S1Q92572 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.64■□□□□ 0.25
AP3S1Q92572 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
AP3S1Q92572 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
AP3S1Q92572 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S1Q92572 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
AP3S1Q92572 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
AP3S1Q92572 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
AP3S1Q92572 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
AP3S1Q92572 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S1Q92572 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
AP3S1Q92572 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
AP3S1Q92572 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S1Q92572 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S1Q92572 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S1Q92572 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S1Q92572 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
AP3S1Q92572 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.63■□□□□ 0.25
AP3S1Q92572 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S1Q92572 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S1Q92572 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S1Q92572 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
AP3S1Q92572 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S1Q92572 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S1Q92572 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S1Q92572 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
AP3S1Q92572 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S1Q92572 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S1Q92572 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.63■□□□□ 0.25
AP3S1Q92572 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.63■□□□□ 0.25
AP3S1Q92572 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.63■□□□□ 0.25
AP3S1Q92572 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.63■□□□□ 0.25
AP3S1Q92572 MIR939-201ENST00000401314 82 ntBASIC16.63■□□□□ 0.25
AP3S1Q92572 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S1Q92572 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S1Q92572 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S1Q92572 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S1Q92572 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms