Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF248Q8NDW4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ZNF248Q8NDW4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF248Q8NDW4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF248Q8NDW4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 HBZP1-201ENST00000354915 429 ntBASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 TSSC2-201ENST00000450217 709 ntBASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 AL121672.3-201ENST00000608644 468 ntBASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF248Q8NDW4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 AP000347.1-202ENST00000435868 847 ntBASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 SPDYE13P-201ENST00000445314 798 ntBASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 BX276092.5-203ENST00000456199 560 ntBASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 AC034232.1-201ENST00000506026 1064 ntBASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 PCDHAC2-203ENST00000615316 3011 ntBASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 BCL2-203ENST00000589955 5011 ntBASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF248Q8NDW4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 KRT8P41-201ENST00000533985 1514 ntBASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.03■□□□□ 0.48
ZNF248Q8NDW4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 AC112907.3-201ENST00000577781 2400 ntBASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms