Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC168Q8NDH2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CCDC168Q8NDH2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC168Q8NDH2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC168Q8NDH2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC168Q8NDH2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC168Q8NDH2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CCDC168Q8NDH2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.77■□□□□ 0.11
CCDC168Q8NDH2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CCDC168Q8NDH2 AC004832.2-201ENST00000426397 482 ntBASIC15.77■□□□□ 0.11
CCDC168Q8NDH2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC168Q8NDH2 KRT18P23-201ENST00000435622 1283 ntBASIC15.77■□□□□ 0.11
CCDC168Q8NDH2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.77■□□□□ 0.11
CCDC168Q8NDH2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC168Q8NDH2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.77■□□□□ 0.11
CCDC168Q8NDH2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.77■□□□□ 0.11
CCDC168Q8NDH2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC168Q8NDH2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC168Q8NDH2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC168Q8NDH2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.77■□□□□ 0.11
CCDC168Q8NDH2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC168Q8NDH2 EP400NL-214ENST00000641289 2402 ntBASIC15.77■□□□□ 0.11
CCDC168Q8NDH2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC168Q8NDH2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 AL591424.1-201ENST00000442569 1213 ntBASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 AC007225.1-201ENST00000566331 1836 ntBASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC168Q8NDH2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 AL691432.2-201ENST00000607222 2038 ntBASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 AL049840.3-201ENST00000602669 611 ntBASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC168Q8NDH2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 AC239800.4-201ENST00000603712 296 ntBASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 FAM215A-202ENST00000632077 792 ntBASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC168Q8NDH2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms