Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 AL590627.1-203ENST00000421194 1026 ntBASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 AC091607.1-201ENST00000490318 1060 ntBASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 Z69720.1-201ENST00000601483 472 ntBASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 AL592071.1-201ENST00000611956 408 ntBASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 KRT8P7-201ENST00000533003 1432 ntBASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
LINC00116Q8NCU8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.91■■□□□ 1.42
LINC00116Q8NCU8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
LINC00116Q8NCU8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LINC00116Q8NCU8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LINC00116Q8NCU8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
LINC00116Q8NCU8 AF238378.1-201ENST00000526806 358 ntBASIC23.91■■□□□ 1.42
LINC00116Q8NCU8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC23.91■■□□□ 1.42
LINC00116Q8NCU8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.91■■□□□ 1.42
LINC00116Q8NCU8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
LINC00116Q8NCU8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LINC00116Q8NCU8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LINC00116Q8NCU8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LINC00116Q8NCU8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 RN7SL606P-201ENST00000472779 293 ntBASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 GPR32P1-201ENST00000601788 811 ntBASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 REXO1L6P-202ENST00000619970 1078 ntBASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 AC139530.3-201ENST00000620344 690 ntBASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LINC00116Q8NCU8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
LINC00116Q8NCU8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.89■■□□□ 1.42
LINC00116Q8NCU8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.89■■□□□ 1.42
LINC00116Q8NCU8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
LINC00116Q8NCU8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
LINC00116Q8NCU8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.89■■□□□ 1.41
LINC00116Q8NCU8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC23.89■■□□□ 1.41
LINC00116Q8NCU8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
LINC00116Q8NCU8 IGHGP-201ENST00000390555 1178 ntBASIC23.89■■□□□ 1.41
LINC00116Q8NCU8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC23.89■■□□□ 1.41
LINC00116Q8NCU8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC23.89■■□□□ 1.41
LINC00116Q8NCU8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC23.89■■□□□ 1.41
LINC00116Q8NCU8 SAPCD2P3-201ENST00000455031 850 ntBASIC23.89■■□□□ 1.41
LINC00116Q8NCU8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
LINC00116Q8NCU8 AF228730.7-201ENST00000641842 219 ntBASIC23.89■■□□□ 1.41
LINC00116Q8NCU8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
LINC00116Q8NCU8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
LINC00116Q8NCU8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
LINC00116Q8NCU8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
LINC00116Q8NCU8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
LINC00116Q8NCU8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
LINC00116Q8NCU8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
LINC00116Q8NCU8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LINC00116Q8NCU8 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.88■■□□□ 1.41
LINC00116Q8NCU8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LINC00116Q8NCU8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC23.88■■□□□ 1.41
LINC00116Q8NCU8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LINC00116Q8NCU8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LINC00116Q8NCU8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LINC00116Q8NCU8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.88■■□□□ 1.41
LINC00116Q8NCU8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
LINC00116Q8NCU8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC23.88■■□□□ 1.41
LINC00116Q8NCU8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
LINC00116Q8NCU8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
LINC00116Q8NCU8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
LINC00116Q8NCU8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
LINC00116Q8NCU8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.88■■□□□ 1.41
LINC00116Q8NCU8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LINC00116Q8NCU8 NSUN5P1-202ENST00000421140 1535 ntBASIC23.88■■□□□ 1.41
LINC00116Q8NCU8 NSUN5P2-203ENST00000457352 1529 ntBASIC23.88■■□□□ 1.41
LINC00116Q8NCU8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.88■■□□□ 1.41
LINC00116Q8NCU8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms