Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCSK9Q8NBP7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 AC008556.1-201ENST00000610908 2040 ntBASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 AC079781.3-201ENST00000449110 356 ntBASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 AC007375.3-201ENST00000600936 2314 ntBASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCSK9Q8NBP7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCSK9Q8NBP7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.83■□□□□ 0.93
PCSK9Q8NBP7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCSK9Q8NBP7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.83■□□□□ 0.93
PCSK9Q8NBP7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PCSK9Q8NBP7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.83■□□□□ 0.93
PCSK9Q8NBP7 AL022342.1-201ENST00000400363 863 ntBASIC20.83■□□□□ 0.93
PCSK9Q8NBP7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
PCSK9Q8NBP7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PCSK9Q8NBP7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.83■□□□□ 0.93
PCSK9Q8NBP7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCSK9Q8NBP7 AL662844.1-201ENST00000546340 181 ntBASIC20.83■□□□□ 0.93
PCSK9Q8NBP7 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.83■□□□□ 0.93
PCSK9Q8NBP7 AL390719.2-201ENST00000606993 987 ntBASIC20.83■□□□□ 0.93
PCSK9Q8NBP7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCSK9Q8NBP7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PCSK9Q8NBP7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PCSK9Q8NBP7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCSK9Q8NBP7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCSK9Q8NBP7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PCSK9Q8NBP7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCSK9Q8NBP7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCSK9Q8NBP7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCSK9Q8NBP7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.83■□□□□ 0.92
PCSK9Q8NBP7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 AC106795.1-205ENST00000512851 1056 ntBASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 AC074051.2-201ENST00000565115 352 ntBASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 MIR3180-4-201ENST00000582223 153 ntBASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 Z69720.1-201ENST00000601483 472 ntBASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 AIRN-201ENST00000601203 4374 ntBASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCSK9Q8NBP7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCSK9Q8NBP7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.81■□□□□ 0.92
PCSK9Q8NBP7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.81■□□□□ 0.92
PCSK9Q8NBP7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCSK9Q8NBP7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCSK9Q8NBP7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCSK9Q8NBP7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCSK9Q8NBP7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCSK9Q8NBP7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.81■□□□□ 0.92
PCSK9Q8NBP7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCSK9Q8NBP7 AP002469.2-201ENST00000531724 424 ntBASIC20.81■□□□□ 0.92
PCSK9Q8NBP7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.81■□□□□ 0.92
PCSK9Q8NBP7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCSK9Q8NBP7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCSK9Q8NBP7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.81■□□□□ 0.92
PCSK9Q8NBP7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCSK9Q8NBP7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PCSK9Q8NBP7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCSK9Q8NBP7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms