Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
C3orf56Q8N813 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
C3orf56Q8N813 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.75□□□□□ -0.05
C3orf56Q8N813 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.75□□□□□ -0.05
C3orf56Q8N813 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
C3orf56Q8N813 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
C3orf56Q8N813 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.75□□□□□ -0.05
C3orf56Q8N813 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
C3orf56Q8N813 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
C3orf56Q8N813 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
C3orf56Q8N813 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
C3orf56Q8N813 FAM220CP-201ENST00000395253 831 ntBASIC14.75□□□□□ -0.05
C3orf56Q8N813 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.75□□□□□ -0.05
C3orf56Q8N813 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.75□□□□□ -0.05
C3orf56Q8N813 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.75□□□□□ -0.05
C3orf56Q8N813 AL136038.4-201ENST00000603606 1261 ntBASIC14.75□□□□□ -0.05
C3orf56Q8N813 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.75□□□□□ -0.05
C3orf56Q8N813 IGHV3-41-201ENST00000613121 348 ntBASIC14.75□□□□□ -0.05
C3orf56Q8N813 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.75□□□□□ -0.05
C3orf56Q8N813 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
C3orf56Q8N813 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
C3orf56Q8N813 AC007225.1-201ENST00000566331 1836 ntBASIC14.75□□□□□ -0.05
C3orf56Q8N813 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
C3orf56Q8N813 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
C3orf56Q8N813 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
C3orf56Q8N813 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
C3orf56Q8N813 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
C3orf56Q8N813 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.74□□□□□ -0.05
C3orf56Q8N813 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C3orf56Q8N813 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C3orf56Q8N813 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C3orf56Q8N813 SMG8-203ENST00000578922 2178 ntBASIC14.74□□□□□ -0.05
C3orf56Q8N813 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.74□□□□□ -0.05
C3orf56Q8N813 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
C3orf56Q8N813 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.74□□□□□ -0.05
C3orf56Q8N813 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
C3orf56Q8N813 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C3orf56Q8N813 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C3orf56Q8N813 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
C3orf56Q8N813 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C3orf56Q8N813 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
C3orf56Q8N813 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
C3orf56Q8N813 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.74□□□□□ -0.05
C3orf56Q8N813 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.74□□□□□ -0.05
C3orf56Q8N813 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
C3orf56Q8N813 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
C3orf56Q8N813 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
C3orf56Q8N813 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
C3orf56Q8N813 KRT16P4-201ENST00000453883 522 ntBASIC14.74□□□□□ -0.05
C3orf56Q8N813 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
C3orf56Q8N813 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.74□□□□□ -0.05
C3orf56Q8N813 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
C3orf56Q8N813 AP001005.1-201ENST00000571755 1248 ntBASIC14.74□□□□□ -0.05
C3orf56Q8N813 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
C3orf56Q8N813 AC090616.6-201ENST00000582640 721 ntBASIC14.74□□□□□ -0.05
C3orf56Q8N813 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C3orf56Q8N813 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.74□□□□□ -0.05
C3orf56Q8N813 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.74□□□□□ -0.05
C3orf56Q8N813 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.74□□□□□ -0.05
C3orf56Q8N813 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C3orf56Q8N813 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
C3orf56Q8N813 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.74□□□□□ -0.05
C3orf56Q8N813 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC14.74□□□□□ -0.05
C3orf56Q8N813 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
C3orf56Q8N813 AC006128.1-201ENST00000624704 1661 ntBASIC14.74□□□□□ -0.05
C3orf56Q8N813 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
C3orf56Q8N813 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC14.74□□□□□ -0.05
C3orf56Q8N813 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.73□□□□□ -0.05
C3orf56Q8N813 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.73□□□□□ -0.05
C3orf56Q8N813 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14.73□□□□□ -0.05
C3orf56Q8N813 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.73□□□□□ -0.05
C3orf56Q8N813 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 MIR574-201ENST00000385209 96 ntBASIC14.73□□□□□ -0.05
C3orf56Q8N813 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.73□□□□□ -0.05
C3orf56Q8N813 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.73□□□□□ -0.05
C3orf56Q8N813 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
C3orf56Q8N813 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.73□□□□□ -0.05
C3orf56Q8N813 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
C3orf56Q8N813 AC099336.1-202ENST00000602961 463 ntBASIC14.73□□□□□ -0.05
C3orf56Q8N813 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
C3orf56Q8N813 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms