Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VPS52Q8N1B4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.46■□□□□ 0.87
VPS52Q8N1B4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.46■□□□□ 0.87
VPS52Q8N1B4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VPS52Q8N1B4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
VPS52Q8N1B4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.46■□□□□ 0.87
VPS52Q8N1B4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.46■□□□□ 0.87
VPS52Q8N1B4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.46■□□□□ 0.87
VPS52Q8N1B4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VPS52Q8N1B4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VPS52Q8N1B4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VPS52Q8N1B4 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.46■□□□□ 0.87
VPS52Q8N1B4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.46■□□□□ 0.87
VPS52Q8N1B4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VPS52Q8N1B4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
VPS52Q8N1B4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VPS52Q8N1B4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
VPS52Q8N1B4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VPS52Q8N1B4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 KRT18P38-201ENST00000449496 1282 ntBASIC20.45■□□□□ 0.86
VPS52Q8N1B4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS52Q8N1B4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 AC093458.2-201ENST00000623150 629 ntBASIC20.44■□□□□ 0.86
VPS52Q8N1B4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
VPS52Q8N1B4 AC125437.2-201ENST00000625180 2167 ntBASIC20.44■□□□□ 0.86
VPS52Q8N1B4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 AL020996.1-203ENST00000536896 2307 ntBASIC20.43■□□□□ 0.86
VPS52Q8N1B4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 AP000523.1-201ENST00000398242 1049 ntBASIC20.43■□□□□ 0.86
VPS52Q8N1B4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.43■□□□□ 0.86
VPS52Q8N1B4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 AC005332.1-201ENST00000577698 1310 ntBASIC20.43■□□□□ 0.86
VPS52Q8N1B4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.43■□□□□ 0.86
VPS52Q8N1B4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms