Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 IRS3P-201ENST00000223076 1006 ntBASIC15.72■□□□□ 0.11
ZNF546Q86UE3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 AL136967.2-201ENST00000623968 743 ntBASIC15.72■□□□□ 0.11
ZNF546Q86UE3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF546Q86UE3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 KRT18P20-201ENST00000548986 1279 ntBASIC15.71■□□□□ 0.11
ZNF546Q86UE3 AP001160.3-201ENST00000601484 763 ntBASIC15.71■□□□□ 0.11
ZNF546Q86UE3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 MIR6084-201ENST00000622012 110 ntBASIC15.71■□□□□ 0.11
ZNF546Q86UE3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF546Q86UE3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
ZNF546Q86UE3 ZNF815P-204ENST00000434898 1737 ntBASIC15.71■□□□□ 0.1
ZNF546Q86UE3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
ZNF546Q86UE3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
ZNF546Q86UE3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ZNF546Q86UE3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
ZNF546Q86UE3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
ZNF546Q86UE3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 AL139384.1-201ENST00000612143 3047 ntBASIC15.7■□□□□ 0.1
ZNF546Q86UE3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 AC097381.1-201ENST00000429019 1296 ntBASIC15.7■□□□□ 0.1
ZNF546Q86UE3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 SLC7A5P2-201ENST00000553010 536 ntBASIC15.7■□□□□ 0.1
ZNF546Q86UE3 AC104187.1-201ENST00000607510 612 ntBASIC15.7■□□□□ 0.1
ZNF546Q86UE3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 AC080080.1-201ENST00000625121 2420 ntBASIC15.7■□□□□ 0.1
ZNF546Q86UE3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF546Q86UE3 CROCCP1-201ENST00000426910 5675 ntBASIC15.7■□□□□ 0.1
ZNF546Q86UE3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF546Q86UE3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
ZNF546Q86UE3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms