Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LDB1Q86U70 AL138781.2-201ENST00000617896 1843 ntBASIC18.86■□□□□ 0.61
LDB1Q86U70 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LDB1Q86U70 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.86■□□□□ 0.61
LDB1Q86U70 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.86■□□□□ 0.61
LDB1Q86U70 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LDB1Q86U70 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LDB1Q86U70 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.85■□□□□ 0.61
LDB1Q86U70 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.85■□□□□ 0.61
LDB1Q86U70 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LDB1Q86U70 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LDB1Q86U70 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LDB1Q86U70 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LDB1Q86U70 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LDB1Q86U70 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LDB1Q86U70 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LDB1Q86U70 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.85■□□□□ 0.61
LDB1Q86U70 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LDB1Q86U70 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LDB1Q86U70 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.85■□□□□ 0.61
LDB1Q86U70 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.85■□□□□ 0.61
LDB1Q86U70 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.85■□□□□ 0.61
LDB1Q86U70 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.85■□□□□ 0.61
LDB1Q86U70 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.85■□□□□ 0.61
LDB1Q86U70 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.85■□□□□ 0.61
LDB1Q86U70 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LDB1Q86U70 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.85■□□□□ 0.61
LDB1Q86U70 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
LDB1Q86U70 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LDB1Q86U70 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LDB1Q86U70 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
LDB1Q86U70 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LDB1Q86U70 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
LDB1Q86U70 NEFHP1-201ENST00000412845 2629 ntBASIC18.85■□□□□ 0.61
LDB1Q86U70 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LDB1Q86U70 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LDB1Q86U70 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDB1Q86U70 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LDB1Q86U70 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.84■□□□□ 0.61
LDB1Q86U70 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LDB1Q86U70 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.84■□□□□ 0.61
LDB1Q86U70 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LDB1Q86U70 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDB1Q86U70 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDB1Q86U70 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDB1Q86U70 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LDB1Q86U70 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDB1Q86U70 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDB1Q86U70 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.84■□□□□ 0.61
LDB1Q86U70 AC012618.2-201ENST00000428058 849 ntBASIC18.84■□□□□ 0.61
LDB1Q86U70 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LDB1Q86U70 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.84■□□□□ 0.61
LDB1Q86U70 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.84■□□□□ 0.61
LDB1Q86U70 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.84■□□□□ 0.61
LDB1Q86U70 AC008550.1-201ENST00000511500 884 ntBASIC18.84■□□□□ 0.61
LDB1Q86U70 NUDT16P1-203ENST00000513809 620 ntBASIC18.84■□□□□ 0.61
LDB1Q86U70 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.84■□□□□ 0.61
LDB1Q86U70 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.84■□□□□ 0.61
LDB1Q86U70 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
LDB1Q86U70 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDB1Q86U70 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LDB1Q86U70 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDB1Q86U70 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDB1Q86U70 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDB1Q86U70 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.84■□□□□ 0.61
LDB1Q86U70 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDB1Q86U70 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.84■□□□□ 0.61
LDB1Q86U70 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.84■□□□□ 0.61
LDB1Q86U70 FSCN1P1-201ENST00000568912 1481 ntBASIC18.84■□□□□ 0.61
LDB1Q86U70 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.84■□□□□ 0.61
LDB1Q86U70 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LDB1Q86U70 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.83■□□□□ 0.61
LDB1Q86U70 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
LDB1Q86U70 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LDB1Q86U70 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
LDB1Q86U70 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LDB1Q86U70 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.83■□□□□ 0.61
LDB1Q86U70 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
LDB1Q86U70 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.83■□□□□ 0.61
LDB1Q86U70 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
LDB1Q86U70 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDB1Q86U70 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
LDB1Q86U70 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
LDB1Q86U70 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
LDB1Q86U70 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.83■□□□□ 0.6
LDB1Q86U70 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.83■□□□□ 0.6
LDB1Q86U70 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.83■□□□□ 0.6
LDB1Q86U70 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.83■□□□□ 0.6
LDB1Q86U70 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.83■□□□□ 0.6
LDB1Q86U70 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.83■□□□□ 0.6
LDB1Q86U70 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.83■□□□□ 0.6
LDB1Q86U70 PRSS44-201ENST00000515154 1146 ntBASIC18.83■□□□□ 0.6
LDB1Q86U70 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.83■□□□□ 0.6
LDB1Q86U70 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.83■□□□□ 0.6
LDB1Q86U70 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.83■□□□□ 0.6
LDB1Q86U70 AC083906.6-201ENST00000641366 219 ntBASIC18.83■□□□□ 0.6
LDB1Q86U70 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LDB1Q86U70 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.83■□□□□ 0.6
LDB1Q86U70 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LDB1Q86U70 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms