Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.99■□□□□ 0.63
LYSMD3Q7Z3D4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 LINC01023-201ENST00000606054 436 ntBASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.98■□□□□ 0.63
LYSMD3Q7Z3D4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 AC120498.9-201ENST00000339021 3867 ntBASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 AC010947.1-201ENST00000623454 693 ntBASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD3Q7Z3D4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 ECEL1P3-201ENST00000427961 737 ntBASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.96■□□□□ 0.63
LYSMD3Q7Z3D4 NAPSB-206ENST00000562112 1266 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms