Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC21.76■■□□□ 1.07
PPP4R3CPQ6ZMV5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 TREX1-205ENST00000625293 1783 ntBASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 INSL6-201ENST00000381641 758 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 HNRNPDP2-201ENST00000406475 478 ntBASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 AL109659.3-201ENST00000624985 950 ntBASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R3CPQ6ZMV5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 MIR718-201ENST00000390190 70 ntBASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 AC123767.1-204ENST00000523523 273 ntTSL 3 BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 AL137802.2-201ENST00000562878 1110 ntBASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 NBPF21P-201ENST00000425093 1451 ntBASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 AC116351.2-201ENST00000606540 1585 ntBASIC21.74■■□□□ 1.07
PPP4R3CPQ6ZMV5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 AC025419.1-202ENST00000535315 744 ntTSL 3 BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 AP003072.3-201ENST00000623456 594 ntBASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 AC139792.2-201ENST00000624218 587 ntBASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.73■■□□□ 1.07
PPP4R3CPQ6ZMV5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PPP4R3CPQ6ZMV5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms