Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 CYP51A1P2-201ENST00000419457 1499 ntBASIC10.33□□□□□ -0.76
UBR4Q5T4S7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 RBM17P3-201ENST00000417687 1192 ntBASIC10.33□□□□□ -0.76
UBR4Q5T4S7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 RNA5SP421-201ENST00000516864 134 ntBASIC10.33□□□□□ -0.76
UBR4Q5T4S7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 TMEM261P1-201ENST00000604899 340 ntBASIC10.33□□□□□ -0.76
UBR4Q5T4S7 C20orf181-201ENST00000623918 480 ntBASIC10.33□□□□□ -0.76
UBR4Q5T4S7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UBR4Q5T4S7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 MIR1909-201ENST00000411312 80 ntBASIC10.32□□□□□ -0.76
UBR4Q5T4S7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 AC125634.1-201ENST00000438758 1403 ntBASIC10.32□□□□□ -0.76
UBR4Q5T4S7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 AL023284.2-201ENST00000405850 579 ntBASIC10.32□□□□□ -0.76
UBR4Q5T4S7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
UBR4Q5T4S7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 MKNK2P1-201ENST00000437526 628 ntBASIC10.31□□□□□ -0.76
UBR4Q5T4S7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 AC004449.1-201ENST00000564240 433 ntBASIC10.31□□□□□ -0.76
UBR4Q5T4S7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 FAM99A-202ENST00000538190 1989 ntBASIC10.31□□□□□ -0.76
UBR4Q5T4S7 AC080038.3-201ENST00000623346 1952 ntBASIC10.31□□□□□ -0.76
UBR4Q5T4S7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 MTDHP3-201ENST00000594186 672 ntBASIC10.31□□□□□ -0.76
UBR4Q5T4S7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBR4Q5T4S7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBR4Q5T4S7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBR4Q5T4S7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBR4Q5T4S7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC10.3□□□□□ -0.76
UBR4Q5T4S7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBR4Q5T4S7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC10.3□□□□□ -0.76
UBR4Q5T4S7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms