Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
ALFQ53S48 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.43■□□□□ 0.7
ALFQ53S48 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.43■□□□□ 0.7
ALFQ53S48 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALFQ53S48 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.42■□□□□ 0.7
ALFQ53S48 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ALFQ53S48 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALFQ53S48 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.42■□□□□ 0.7
ALFQ53S48 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALFQ53S48 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ALFQ53S48 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.42■□□□□ 0.7
ALFQ53S48 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALFQ53S48 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALFQ53S48 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALFQ53S48 AC005521.1-201ENST00000393351 872 ntBASIC19.42■□□□□ 0.7
ALFQ53S48 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ALFQ53S48 AC113347.1-201ENST00000413321 391 ntBASIC19.42■□□□□ 0.7
ALFQ53S48 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ALFQ53S48 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.42■□□□□ 0.7
ALFQ53S48 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.42■□□□□ 0.7
ALFQ53S48 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.42■□□□□ 0.7
ALFQ53S48 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ALFQ53S48 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
ALFQ53S48 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.42■□□□□ 0.7
ALFQ53S48 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ALFQ53S48 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.42■□□□□ 0.7
ALFQ53S48 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALFQ53S48 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALFQ53S48 GPAT2P1-201ENST00000444924 1672 ntBASIC19.42■□□□□ 0.7
ALFQ53S48 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ALFQ53S48 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALFQ53S48 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.42■□□□□ 0.7
ALFQ53S48 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ALFQ53S48 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALFQ53S48 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALFQ53S48 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALFQ53S48 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALFQ53S48 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.41■□□□□ 0.7
ALFQ53S48 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ALFQ53S48 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALFQ53S48 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALFQ53S48 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.41■□□□□ 0.7
ALFQ53S48 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALFQ53S48 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALFQ53S48 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALFQ53S48 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ALFQ53S48 RCN1P1-201ENST00000400413 996 ntBASIC19.41■□□□□ 0.7
ALFQ53S48 HMGA1P5-201ENST00000412453 271 ntBASIC19.41■□□□□ 0.7
ALFQ53S48 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALFQ53S48 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.41■□□□□ 0.7
ALFQ53S48 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.41■□□□□ 0.7
ALFQ53S48 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALFQ53S48 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALFQ53S48 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALFQ53S48 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALFQ53S48 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.41■□□□□ 0.7
ALFQ53S48 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ALFQ53S48 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALFQ53S48 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ALFQ53S48 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ALFQ53S48 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALFQ53S48 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALFQ53S48 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ALFQ53S48 TERF1P1-201ENST00000311003 1181 ntBASIC19.4■□□□□ 0.7
ALFQ53S48 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALFQ53S48 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ALFQ53S48 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.4■□□□□ 0.7
ALFQ53S48 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ALFQ53S48 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.4■□□□□ 0.7
ALFQ53S48 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ALFQ53S48 AL512353.2-201ENST00000448759 1962 ntBASIC19.4■□□□□ 0.7
ALFQ53S48 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ALFQ53S48 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALFQ53S48 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALFQ53S48 AC073508.3-201ENST00000619697 1419 ntBASIC19.4■□□□□ 0.7
ALFQ53S48 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALFQ53S48 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ALFQ53S48 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALFQ53S48 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALFQ53S48 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ALFQ53S48 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
ALFQ53S48 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ALFQ53S48 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.39■□□□□ 0.7
ALFQ53S48 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.39■□□□□ 0.69
ALFQ53S48 AL023284.2-201ENST00000405850 579 ntBASIC19.39■□□□□ 0.69
ALFQ53S48 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.39■□□□□ 0.69
ALFQ53S48 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.39■□□□□ 0.69
ALFQ53S48 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.39■□□□□ 0.69
ALFQ53S48 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ALFQ53S48 KRT8P45-201ENST00000414328 1447 ntBASIC19.39■□□□□ 0.69
ALFQ53S48 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALFQ53S48 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.39■□□□□ 0.69
ALFQ53S48 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALFQ53S48 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALFQ53S48 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.39■□□□□ 0.69
ALFQ53S48 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALFQ53S48 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALFQ53S48 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ALFQ53S48 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ALFQ53S48 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms