Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 AC124864.1-201ENST00000623408 392 ntBASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 FAM215A-202ENST00000632077 792 ntBASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RSPO4Q2I0M5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 YBX2P1-201ENST00000394192 760 ntBASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 FAM197Y3-203ENST00000618346 717 ntBASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 AC112497.1-201ENST00000624824 639 ntBASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.28■□□□□ 0.52
RSPO4Q2I0M5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 AC104109.2-201ENST00000602919 1418 ntBASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 DNAJB3-201ENST00000446806 729 ntBASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 HLA-J-203ENST00000494367 1087 ntBASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 AL591684.3-201ENST00000605187 298 ntBASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 AC008608.2-201ENST00000606089 416 ntBASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 AL592071.1-201ENST00000611956 408 ntBASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RSPO4Q2I0M5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RSPO4Q2I0M5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.27■□□□□ 0.51
RSPO4Q2I0M5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RSPO4Q2I0M5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.27■□□□□ 0.51
RSPO4Q2I0M5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RSPO4Q2I0M5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms