Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD47Q08722 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CD47Q08722 AC006557.6-201ENST00000623071 864 ntBASIC17.55■□□□□ 0.4
CD47Q08722 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.55■□□□□ 0.4
CD47Q08722 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CD47Q08722 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD47Q08722 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CD47Q08722 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD47Q08722 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.55■□□□□ 0.4
CD47Q08722 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CD47Q08722 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD47Q08722 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CD47Q08722 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.55■□□□□ 0.4
CD47Q08722 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD47Q08722 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD47Q08722 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD47Q08722 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CD47Q08722 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CD47Q08722 AC012313.1-201ENST00000593393 3059 ntBASIC17.54■□□□□ 0.4
CD47Q08722 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD47Q08722 AC092368.3-202ENST00000574180 1591 ntBASIC17.54■□□□□ 0.4
CD47Q08722 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD47Q08722 SDHAP1-207ENST00000440850 2000 ntBASIC17.54■□□□□ 0.4
CD47Q08722 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD47Q08722 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.54■□□□□ 0.4
CD47Q08722 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CD47Q08722 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.54■□□□□ 0.4
CD47Q08722 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.54■□□□□ 0.4
CD47Q08722 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CD47Q08722 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CD47Q08722 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CD47Q08722 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD47Q08722 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD47Q08722 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CD47Q08722 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.54■□□□□ 0.4
CD47Q08722 AC008764.6-201ENST00000595909 2069 ntBASIC17.54■□□□□ 0.4
CD47Q08722 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD47Q08722 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CD47Q08722 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD47Q08722 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD47Q08722 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
CD47Q08722 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD47Q08722 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CD47Q08722 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CD47Q08722 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CD47Q08722 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CD47Q08722 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD47Q08722 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
CD47Q08722 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CD47Q08722 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CD47Q08722 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.53■□□□□ 0.4
CD47Q08722 AC073210.2-201ENST00000430369 194 ntBASIC17.53■□□□□ 0.4
CD47Q08722 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.53■□□□□ 0.4
CD47Q08722 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.53■□□□□ 0.4
CD47Q08722 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.53■□□□□ 0.4
CD47Q08722 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.53■□□□□ 0.4
CD47Q08722 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.53■□□□□ 0.4
CD47Q08722 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CD47Q08722 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD47Q08722 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD47Q08722 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD47Q08722 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.53■□□□□ 0.4
CD47Q08722 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.53■□□□□ 0.4
CD47Q08722 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD47Q08722 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CD47Q08722 AC116351.2-201ENST00000606540 1585 ntBASIC17.53■□□□□ 0.4
CD47Q08722 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD47Q08722 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.53■□□□□ 0.4
CD47Q08722 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CD47Q08722 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD47Q08722 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD47Q08722 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD47Q08722 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD47Q08722 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.52■□□□□ 0.4
CD47Q08722 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.52■□□□□ 0.4
CD47Q08722 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CD47Q08722 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD47Q08722 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD47Q08722 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD47Q08722 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CD47Q08722 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD47Q08722 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CD47Q08722 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.52■□□□□ 0.4
CD47Q08722 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.52■□□□□ 0.4
CD47Q08722 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD47Q08722 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.52■□□□□ 0.4
CD47Q08722 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD47Q08722 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.52■□□□□ 0.4
CD47Q08722 AC104771.1-201ENST00000603335 964 ntBASIC17.52■□□□□ 0.4
CD47Q08722 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
CD47Q08722 HLA-B-256ENST00000639848 1089 ntBASIC17.52■□□□□ 0.4
CD47Q08722 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.52■□□□□ 0.4
CD47Q08722 MYC-209ENST00000641252 345 ntBASIC17.52■□□□□ 0.4
CD47Q08722 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CD47Q08722 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD47Q08722 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CD47Q08722 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CD47Q08722 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CD47Q08722 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
CD47Q08722 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms