Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.37□□□□□ -0.27
RPL39P62891 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL39P62891 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL39P62891 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL39P62891 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL39P62891 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL39P62891 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
RPL39P62891 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RPL39P62891 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC13.37□□□□□ -0.27
RPL39P62891 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC13.37□□□□□ -0.27
RPL39P62891 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
RPL39P62891 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RPL39P62891 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.37□□□□□ -0.27
RPL39P62891 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RPL39P62891 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RPL39P62891 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.36□□□□□ -0.27
RPL39P62891 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
RPL39P62891 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC13.36□□□□□ -0.27
RPL39P62891 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.36□□□□□ -0.27
RPL39P62891 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.36□□□□□ -0.27
RPL39P62891 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.36□□□□□ -0.27
RPL39P62891 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.36□□□□□ -0.27
RPL39P62891 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.36□□□□□ -0.27
RPL39P62891 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.36□□□□□ -0.27
RPL39P62891 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RPL39P62891 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 AC106820.2-201ENST00000563775 3264 ntBASIC13.36□□□□□ -0.27
RPL39P62891 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.36□□□□□ -0.27
RPL39P62891 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.36□□□□□ -0.27
RPL39P62891 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RPL39P62891 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
RPL39P62891 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RPL39P62891 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
RPL39P62891 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.35□□□□□ -0.27
RPL39P62891 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.35□□□□□ -0.27
RPL39P62891 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 HACD1-201ENST00000326961 773 ntTSL 2 BASIC13.35□□□□□ -0.27
RPL39P62891 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 GPX1P1-201ENST00000388829 606 ntBASIC13.35□□□□□ -0.27
RPL39P62891 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RPL39P62891 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC13.35□□□□□ -0.27
RPL39P62891 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
RPL39P62891 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.35□□□□□ -0.27
RPL39P62891 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.35□□□□□ -0.27
RPL39P62891 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.35□□□□□ -0.27
RPL39P62891 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
RPL39P62891 AC139713.2-201ENST00000641328 2723 ntBASIC13.35□□□□□ -0.27
RPL39P62891 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
RPL39P62891 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RPL39P62891 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RPL39P62891 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL39P62891 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RPL39P62891 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RPL39P62891 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.34□□□□□ -0.27
RPL39P62891 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RPL39P62891 AC073592.3-201ENST00000625118 1834 ntBASIC13.34□□□□□ -0.27
RPL39P62891 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms