Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ZC3H6P61129 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZC3H6P61129 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZC3H6P61129 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.23■■□□□ 1.63
ZC3H6P61129 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC25.23■■□□□ 1.63
ZC3H6P61129 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZC3H6P61129 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZC3H6P61129 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ZC3H6P61129 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ZC3H6P61129 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
ZC3H6P61129 AL137060.1-201ENST00000618151 2648 ntBASIC25.22■■□□□ 1.63
ZC3H6P61129 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC25.22■■□□□ 1.63
ZC3H6P61129 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC25.22■■□□□ 1.63
ZC3H6P61129 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ZC3H6P61129 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ZC3H6P61129 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ZC3H6P61129 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
ZC3H6P61129 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC25.22■■□□□ 1.63
ZC3H6P61129 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ZC3H6P61129 ABR-204ENST00000543210 1049 ntTSL 2 BASIC25.22■■□□□ 1.63
ZC3H6P61129 AC104390.1-201ENST00000555663 520 ntBASIC25.22■■□□□ 1.63
ZC3H6P61129 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC25.22■■□□□ 1.63
ZC3H6P61129 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
ZC3H6P61129 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC25.22■■□□□ 1.63
ZC3H6P61129 RCC2P3-201ENST00000418112 1537 ntBASIC25.22■■□□□ 1.63
ZC3H6P61129 GABARAPL3-202ENST00000624044 1851 ntBASIC25.21■■□□□ 1.63
ZC3H6P61129 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZC3H6P61129 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZC3H6P61129 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC25.21■■□□□ 1.63
ZC3H6P61129 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZC3H6P61129 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC25.21■■□□□ 1.63
ZC3H6P61129 TEX30-205ENST00000376029 959 ntTSL 2 BASIC25.21■■□□□ 1.63
ZC3H6P61129 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZC3H6P61129 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZC3H6P61129 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC25.21■■□□□ 1.63
ZC3H6P61129 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
ZC3H6P61129 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
ZC3H6P61129 NME4-212ENST00000621774 904 ntTSL 3 BASIC25.21■■□□□ 1.63
ZC3H6P61129 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ZC3H6P61129 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC25.21■■□□□ 1.63
ZC3H6P61129 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZC3H6P61129 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ZC3H6P61129 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ZC3H6P61129 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC25.21■■□□□ 1.63
ZC3H6P61129 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC25.2■■□□□ 1.63
ZC3H6P61129 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
ZC3H6P61129 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC25.2■■□□□ 1.62
ZC3H6P61129 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC25.2■■□□□ 1.62
ZC3H6P61129 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC25.2■■□□□ 1.62
ZC3H6P61129 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ZC3H6P61129 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC25.2■■□□□ 1.62
ZC3H6P61129 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
ZC3H6P61129 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC25.2■■□□□ 1.62
ZC3H6P61129 AL590627.1-203ENST00000421194 1026 ntBASIC25.2■■□□□ 1.62
ZC3H6P61129 IGHV3-47-201ENST00000425060 335 ntBASIC25.2■■□□□ 1.62
ZC3H6P61129 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ZC3H6P61129 BET1L-206ENST00000486280 665 ntTSL 3 BASIC25.2■■□□□ 1.62
ZC3H6P61129 PENK-208ENST00000523051 772 ntTSL 5 BASIC25.2■■□□□ 1.62
ZC3H6P61129 BX640515.1-201ENST00000617215 977 ntBASIC25.2■■□□□ 1.62
ZC3H6P61129 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ZC3H6P61129 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC25.2■■□□□ 1.62
ZC3H6P61129 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC25.2■■□□□ 1.62
ZC3H6P61129 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
ZC3H6P61129 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
ZC3H6P61129 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZC3H6P61129 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
ZC3H6P61129 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
ZC3H6P61129 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
ZC3H6P61129 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
ZC3H6P61129 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC25.19■■□□□ 1.62
ZC3H6P61129 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC25.19■■□□□ 1.62
ZC3H6P61129 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZC3H6P61129 TCF3P1-201ENST00000423021 1937 ntBASIC25.19■■□□□ 1.62
ZC3H6P61129 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC25.19■■□□□ 1.62
ZC3H6P61129 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
ZC3H6P61129 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZC3H6P61129 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZC3H6P61129 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
ZC3H6P61129 AL109659.2-201ENST00000606809 1674 ntBASIC25.19■■□□□ 1.62
ZC3H6P61129 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZC3H6P61129 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZC3H6P61129 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC25.18■■□□□ 1.62
ZC3H6P61129 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZC3H6P61129 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC25.18■■□□□ 1.62
ZC3H6P61129 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZC3H6P61129 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ZC3H6P61129 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZC3H6P61129 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC25.18■■□□□ 1.62
ZC3H6P61129 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC25.18■■□□□ 1.62
ZC3H6P61129 Z69720.1-201ENST00000601483 472 ntBASIC25.18■■□□□ 1.62
ZC3H6P61129 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ZC3H6P61129 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZC3H6P61129 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC25.18■■□□□ 1.62
ZC3H6P61129 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZC3H6P61129 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ZC3H6P61129 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZC3H6P61129 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC25.17■■□□□ 1.62
ZC3H6P61129 AL512353.2-201ENST00000448759 1962 ntBASIC25.17■■□□□ 1.62
ZC3H6P61129 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC25.17■■□□□ 1.62
ZC3H6P61129 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms