Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.23■□□□□ 0.35
CXCR4P61073 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CXCR4P61073 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CXCR4P61073 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CXCR4P61073 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CXCR4P61073 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CXCR4P61073 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.23■□□□□ 0.35
CXCR4P61073 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CXCR4P61073 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CXCR4P61073 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CXCR4P61073 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.22■□□□□ 0.35
CXCR4P61073 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.22■□□□□ 0.35
CXCR4P61073 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CXCR4P61073 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.22■□□□□ 0.35
CXCR4P61073 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CXCR4P61073 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CXCR4P61073 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CXCR4P61073 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CXCR4P61073 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CXCR4P61073 AC026271.2-201ENST00000428091 497 ntBASIC17.22■□□□□ 0.35
CXCR4P61073 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.22■□□□□ 0.35
CXCR4P61073 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CXCR4P61073 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CXCR4P61073 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CXCR4P61073 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CXCR4P61073 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.22■□□□□ 0.35
CXCR4P61073 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CXCR4P61073 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.22■□□□□ 0.35
CXCR4P61073 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.22■□□□□ 0.35
CXCR4P61073 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CXCR4P61073 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CXCR4P61073 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
CXCR4P61073 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CXCR4P61073 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCR4P61073 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CXCR4P61073 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.21■□□□□ 0.35
CXCR4P61073 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCR4P61073 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.21■□□□□ 0.35
CXCR4P61073 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCR4P61073 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CXCR4P61073 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCR4P61073 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CXCR4P61073 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCR4P61073 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCR4P61073 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCR4P61073 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CXCR4P61073 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CXCR4P61073 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CXCR4P61073 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.21■□□□□ 0.35
CXCR4P61073 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCR4P61073 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.21■□□□□ 0.35
CXCR4P61073 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.21■□□□□ 0.35
CXCR4P61073 RARRES2P6-201ENST00000567333 442 ntBASIC17.21■□□□□ 0.35
CXCR4P61073 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.21■□□□□ 0.35
CXCR4P61073 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CXCR4P61073 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.21■□□□□ 0.35
CXCR4P61073 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CXCR4P61073 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.21■□□□□ 0.35
CXCR4P61073 HCG11-201ENST00000411553 5696 ntBASIC17.21■□□□□ 0.35
CXCR4P61073 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CXCR4P61073 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.34
CXCR4P61073 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.21■□□□□ 0.34
CXCR4P61073 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CXCR4P61073 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CXCR4P61073 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXCR4P61073 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXCR4P61073 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
CXCR4P61073 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CXCR4P61073 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CXCR4P61073 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CXCR4P61073 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXCR4P61073 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXCR4P61073 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.2■□□□□ 0.34
CXCR4P61073 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.2■□□□□ 0.34
CXCR4P61073 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.2■□□□□ 0.34
CXCR4P61073 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXCR4P61073 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.2■□□□□ 0.34
CXCR4P61073 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXCR4P61073 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.2■□□□□ 0.34
CXCR4P61073 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CXCR4P61073 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.2■□□□□ 0.34
CXCR4P61073 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CXCR4P61073 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.2■□□□□ 0.34
CXCR4P61073 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CXCR4P61073 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXCR4P61073 KRT8P8-201ENST00000434750 1448 ntBASIC17.2■□□□□ 0.34
CXCR4P61073 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CXCR4P61073 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXCR4P61073 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXCR4P61073 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CXCR4P61073 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CXCR4P61073 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CXCR4P61073 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.2■□□□□ 0.34
CXCR4P61073 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.2■□□□□ 0.34
CXCR4P61073 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CXCR4P61073 AC009053.2-201ENST00000563701 2365 ntBASIC17.2■□□□□ 0.34
CXCR4P61073 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
CXCR4P61073 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CXCR4P61073 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CXCR4P61073 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms