Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.77■□□□□ 0.44
RAB38P57729 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAB38P57729 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.77■□□□□ 0.44
RAB38P57729 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB38P57729 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RAB38P57729 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.77■□□□□ 0.44
RAB38P57729 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RAB38P57729 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAB38P57729 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RAB38P57729 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAB38P57729 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RAB38P57729 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RAB38P57729 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RAB38P57729 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAB38P57729 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAB38P57729 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RAB38P57729 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.76■□□□□ 0.43
RAB38P57729 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB38P57729 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB38P57729 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB38P57729 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB38P57729 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB38P57729 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB38P57729 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB38P57729 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.76■□□□□ 0.43
RAB38P57729 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB38P57729 AL023284.2-201ENST00000405850 579 ntBASIC17.76■□□□□ 0.43
RAB38P57729 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.76■□□□□ 0.43
RAB38P57729 ECEL1P2-202ENST00000465689 757 ntBASIC17.76■□□□□ 0.43
RAB38P57729 AC012306.2-201ENST00000609350 630 ntBASIC17.76■□□□□ 0.43
RAB38P57729 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RAB38P57729 AC097493.4-201ENST00000641197 219 ntBASIC17.76■□□□□ 0.43
RAB38P57729 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB38P57729 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB38P57729 RCC2P3-201ENST00000418112 1537 ntBASIC17.76■□□□□ 0.43
RAB38P57729 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB38P57729 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB38P57729 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB38P57729 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RAB38P57729 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB38P57729 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB38P57729 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB38P57729 GPAT2P1-201ENST00000444924 1672 ntBASIC17.75■□□□□ 0.43
RAB38P57729 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB38P57729 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB38P57729 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB38P57729 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB38P57729 AC211429.1-201ENST00000415277 523 ntBASIC17.75■□□□□ 0.43
RAB38P57729 MCCD1P1-208ENST00000445732 328 ntBASIC17.75■□□□□ 0.43
RAB38P57729 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB38P57729 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB38P57729 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB38P57729 MIR4674-201ENST00000582457 87 ntBASIC17.75■□□□□ 0.43
RAB38P57729 LINC01023-201ENST00000606054 436 ntBASIC17.75■□□□□ 0.43
RAB38P57729 FAM87A-204ENST00000613235 858 ntBASIC17.75■□□□□ 0.43
RAB38P57729 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RAB38P57729 AC068587.9-201ENST00000641814 219 ntBASIC17.75■□□□□ 0.43
RAB38P57729 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RAB38P57729 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB38P57729 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB38P57729 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB38P57729 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB38P57729 AC006333.2-201ENST00000607957 2099 ntBASIC17.75■□□□□ 0.43
RAB38P57729 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RAB38P57729 AC018445.3-201ENST00000624177 1945 ntBASIC17.74■□□□□ 0.43
RAB38P57729 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB38P57729 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB38P57729 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB38P57729 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB38P57729 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB38P57729 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RAB38P57729 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB38P57729 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB38P57729 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB38P57729 HMGA1P5-201ENST00000412453 271 ntBASIC17.74■□□□□ 0.43
RAB38P57729 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
RAB38P57729 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
RAB38P57729 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
RAB38P57729 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB38P57729 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RAB38P57729 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB38P57729 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB38P57729 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB38P57729 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB38P57729 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB38P57729 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB38P57729 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB38P57729 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB38P57729 HEIH-201ENST00000623091 1652 ntBASIC17.74■□□□□ 0.43
RAB38P57729 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB38P57729 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB38P57729 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB38P57729 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB38P57729 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB38P57729 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB38P57729 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB38P57729 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB38P57729 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.73■□□□□ 0.43
RAB38P57729 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RAB38P57729 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms