Protein–RNA interactions for Protein: P55769

SNU13, NHP2-like protein 1, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13P55769 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNU13P55769 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNU13P55769 AC079598.2-202ENST00000546624 1451 ntBASIC16.3■□□□□ 0.2
SNU13P55769 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNU13P55769 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SNU13P55769 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.3■□□□□ 0.2
SNU13P55769 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNU13P55769 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNU13P55769 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNU13P55769 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNU13P55769 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNU13P55769 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SNU13P55769 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNU13P55769 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.3■□□□□ 0.2
SNU13P55769 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.3■□□□□ 0.2
SNU13P55769 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.3■□□□□ 0.2
SNU13P55769 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.3■□□□□ 0.2
SNU13P55769 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.3■□□□□ 0.2
SNU13P55769 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.3■□□□□ 0.2
SNU13P55769 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.3■□□□□ 0.2
SNU13P55769 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.3■□□□□ 0.2
SNU13P55769 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.3■□□□□ 0.2
SNU13P55769 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNU13P55769 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNU13P55769 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNU13P55769 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SNU13P55769 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SNU13P55769 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SNU13P55769 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SNU13P55769 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.29■□□□□ 0.2
SNU13P55769 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNU13P55769 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNU13P55769 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNU13P55769 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNU13P55769 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.29■□□□□ 0.2
SNU13P55769 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.29■□□□□ 0.2
SNU13P55769 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNU13P55769 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNU13P55769 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SNU13P55769 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SNU13P55769 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.29■□□□□ 0.2
SNU13P55769 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNU13P55769 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNU13P55769 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.29■□□□□ 0.2
SNU13P55769 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SNU13P55769 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNU13P55769 AC233263.1-201ENST00000578059 224 ntBASIC16.29■□□□□ 0.2
SNU13P55769 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.29■□□□□ 0.2
SNU13P55769 AC008403.3-201ENST00000598924 454 ntBASIC16.29■□□□□ 0.2
SNU13P55769 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.29■□□□□ 0.2
SNU13P55769 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNU13P55769 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNU13P55769 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNU13P55769 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.29■□□□□ 0.2
SNU13P55769 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.29■□□□□ 0.2
SNU13P55769 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNU13P55769 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNU13P55769 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.29■□□□□ 0.2
SNU13P55769 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNU13P55769 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SNU13P55769 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SNU13P55769 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.29■□□□□ 0.2
SNU13P55769 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNU13P55769 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
SNU13P55769 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
SNU13P55769 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNU13P55769 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNU13P55769 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNU13P55769 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SNU13P55769 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNU13P55769 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNU13P55769 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNU13P55769 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNU13P55769 WIZP1-201ENST00000531444 2299 ntBASIC16.28■□□□□ 0.2
SNU13P55769 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.28■□□□□ 0.2
SNU13P55769 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.28■□□□□ 0.2
SNU13P55769 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNU13P55769 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.28■□□□□ 0.2
SNU13P55769 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SNU13P55769 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SNU13P55769 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SNU13P55769 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNU13P55769 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNU13P55769 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SNU13P55769 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNU13P55769 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SNU13P55769 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNU13P55769 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNU13P55769 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNU13P55769 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNU13P55769 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNU13P55769 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SNU13P55769 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.28■□□□□ 0.2
SNU13P55769 AC090164.3-201ENST00000610780 2143 ntBASIC16.28■□□□□ 0.2
SNU13P55769 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNU13P55769 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNU13P55769 AL031598.1-201ENST00000561511 1773 ntBASIC16.28■□□□□ 0.2
SNU13P55769 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNU13P55769 NBPF21P-201ENST00000425093 1451 ntBASIC16.28■□□□□ 0.2
SNU13P55769 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms