Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ATP1B3P54709 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP1B3P54709 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.4■□□□□ 0.22
ATP1B3P54709 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP1B3P54709 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ATP1B3P54709 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
ATP1B3P54709 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
ATP1B3P54709 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.4■□□□□ 0.22
ATP1B3P54709 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ATP1B3P54709 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP1B3P54709 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP1B3P54709 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
ATP1B3P54709 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.4■□□□□ 0.22
ATP1B3P54709 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
ATP1B3P54709 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
ATP1B3P54709 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP1B3P54709 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP1B3P54709 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.4■□□□□ 0.22
ATP1B3P54709 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
ATP1B3P54709 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1B3P54709 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ATP1B3P54709 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1B3P54709 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1B3P54709 FEM1AP3-201ENST00000403722 1741 ntBASIC16.39■□□□□ 0.21
ATP1B3P54709 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
ATP1B3P54709 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1B3P54709 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ATP1B3P54709 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1B3P54709 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1B3P54709 HLA-L-209ENST00000420110 1011 ntBASIC16.39■□□□□ 0.21
ATP1B3P54709 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1B3P54709 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP1B3P54709 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1B3P54709 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP1B3P54709 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.39■□□□□ 0.21
ATP1B3P54709 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1B3P54709 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1B3P54709 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.39■□□□□ 0.21
ATP1B3P54709 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1B3P54709 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1B3P54709 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1B3P54709 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP1B3P54709 AC135050.7-201ENST00000624508 2218 ntBASIC16.39■□□□□ 0.21
ATP1B3P54709 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1B3P54709 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1B3P54709 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP1B3P54709 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1B3P54709 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.39■□□□□ 0.21
ATP1B3P54709 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1B3P54709 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ATP1B3P54709 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1B3P54709 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ATP1B3P54709 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP1B3P54709 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1B3P54709 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
ATP1B3P54709 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1B3P54709 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP1B3P54709 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1B3P54709 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1B3P54709 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.38■□□□□ 0.21
ATP1B3P54709 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1B3P54709 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1B3P54709 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP1B3P54709 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1B3P54709 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1B3P54709 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP1B3P54709 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.38■□□□□ 0.21
ATP1B3P54709 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP1B3P54709 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
ATP1B3P54709 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP1B3P54709 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.38■□□□□ 0.21
ATP1B3P54709 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.38■□□□□ 0.21
ATP1B3P54709 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1B3P54709 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1B3P54709 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP1B3P54709 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.38■□□□□ 0.21
ATP1B3P54709 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.38■□□□□ 0.21
ATP1B3P54709 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
ATP1B3P54709 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms