Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.8■□□□□ 0.92
PMS1P54277 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PMS1P54277 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PMS1P54277 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
PMS1P54277 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PMS1P54277 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PMS1P54277 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.8■□□□□ 0.92
PMS1P54277 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.8■□□□□ 0.92
PMS1P54277 MESTP1-201ENST00000404287 994 ntBASIC20.8■□□□□ 0.92
PMS1P54277 AC004951.3-201ENST00000418645 1148 ntBASIC20.8■□□□□ 0.92
PMS1P54277 FAM201B-201ENST00000458407 597 ntBASIC20.8■□□□□ 0.92
PMS1P54277 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.8■□□□□ 0.92
PMS1P54277 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.8■□□□□ 0.92
PMS1P54277 AC068587.9-201ENST00000641814 219 ntBASIC20.8■□□□□ 0.92
PMS1P54277 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PMS1P54277 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
PMS1P54277 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PMS1P54277 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PMS1P54277 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PMS1P54277 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.8■□□□□ 0.92
PMS1P54277 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.8■□□□□ 0.92
PMS1P54277 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.8■□□□□ 0.92
PMS1P54277 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.8■□□□□ 0.92
PMS1P54277 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PMS1P54277 AC135050.7-201ENST00000624508 2218 ntBASIC20.8■□□□□ 0.92
PMS1P54277 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PMS1P54277 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PMS1P54277 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS1P54277 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS1P54277 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS1P54277 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.79■□□□□ 0.92
PMS1P54277 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS1P54277 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PMS1P54277 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS1P54277 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS1P54277 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS1P54277 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.79■□□□□ 0.92
PMS1P54277 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS1P54277 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PMS1P54277 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.79■□□□□ 0.92
PMS1P54277 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.79■□□□□ 0.92
PMS1P54277 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.79■□□□□ 0.92
PMS1P54277 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.79■□□□□ 0.92
PMS1P54277 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PMS1P54277 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.79■□□□□ 0.92
PMS1P54277 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.79■□□□□ 0.92
PMS1P54277 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.79■□□□□ 0.92
PMS1P54277 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS1P54277 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PMS1P54277 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PMS1P54277 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS1P54277 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PMS1P54277 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PMS1P54277 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.78■□□□□ 0.92
PMS1P54277 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PMS1P54277 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.78■□□□□ 0.92
PMS1P54277 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
PMS1P54277 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PMS1P54277 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PMS1P54277 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PMS1P54277 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PMS1P54277 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PMS1P54277 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.78■□□□□ 0.92
PMS1P54277 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.78■□□□□ 0.92
PMS1P54277 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PMS1P54277 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PMS1P54277 KRT18P29-201ENST00000397031 1267 ntBASIC20.78■□□□□ 0.92
PMS1P54277 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PMS1P54277 AL353807.1-201ENST00000427475 662 ntBASIC20.78■□□□□ 0.92
PMS1P54277 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.78■□□□□ 0.92
PMS1P54277 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PMS1P54277 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.78■□□□□ 0.92
PMS1P54277 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.78■□□□□ 0.92
PMS1P54277 PRSS44-201ENST00000515154 1146 ntBASIC20.78■□□□□ 0.92
PMS1P54277 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PMS1P54277 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.78■□□□□ 0.92
PMS1P54277 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.78■□□□□ 0.92
PMS1P54277 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.78■□□□□ 0.92
PMS1P54277 AC073195.1-201ENST00000607241 877 ntBASIC20.78■□□□□ 0.92
PMS1P54277 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.78■□□□□ 0.92
PMS1P54277 AC011298.2-201ENST00000617989 482 ntBASIC20.78■□□□□ 0.92
PMS1P54277 AC130371.2-201ENST00000619443 611 ntBASIC20.78■□□□□ 0.92
PMS1P54277 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PMS1P54277 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PMS1P54277 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PMS1P54277 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PMS1P54277 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PMS1P54277 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.78■□□□□ 0.92
PMS1P54277 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PMS1P54277 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PMS1P54277 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.77■□□□□ 0.92
PMS1P54277 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PMS1P54277 KRT8P32-201ENST00000512863 1461 ntBASIC20.77■□□□□ 0.92
PMS1P54277 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PMS1P54277 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.77■□□□□ 0.92
PMS1P54277 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.77■□□□□ 0.92
PMS1P54277 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PMS1P54277 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
PMS1P54277 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.77■□□□□ 0.92
PMS1P54277 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms