Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPT1AP50416 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPT1AP50416 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.93■□□□□ 0.94
CPT1AP50416 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.93■□□□□ 0.94
CPT1AP50416 AC104390.1-201ENST00000555663 520 ntBASIC20.93■□□□□ 0.94
CPT1AP50416 RN7SL510P-201ENST00000581311 263 ntBASIC20.93■□□□□ 0.94
CPT1AP50416 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CPT1AP50416 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPT1AP50416 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.93■□□□□ 0.94
CPT1AP50416 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.93■□□□□ 0.94
CPT1AP50416 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPT1AP50416 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPT1AP50416 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPT1AP50416 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.93■□□□□ 0.94
CPT1AP50416 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPT1AP50416 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CPT1AP50416 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.93■□□□□ 0.94
CPT1AP50416 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.93■□□□□ 0.94
CPT1AP50416 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPT1AP50416 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPT1AP50416 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPT1AP50416 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.92■□□□□ 0.94
CPT1AP50416 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPT1AP50416 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPT1AP50416 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.92■□□□□ 0.94
CPT1AP50416 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPT1AP50416 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CPT1AP50416 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.92■□□□□ 0.94
CPT1AP50416 AC010240.3-201ENST00000607688 395 ntBASIC20.92■□□□□ 0.94
CPT1AP50416 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CPT1AP50416 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPT1AP50416 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPT1AP50416 KRT18P1-202ENST00000452408 1331 ntBASIC20.92■□□□□ 0.94
CPT1AP50416 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPT1AP50416 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPT1AP50416 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPT1AP50416 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPT1AP50416 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPT1AP50416 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CPT1AP50416 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPT1AP50416 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPT1AP50416 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.91■□□□□ 0.94
CPT1AP50416 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPT1AP50416 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPT1AP50416 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPT1AP50416 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
CPT1AP50416 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPT1AP50416 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.91■□□□□ 0.94
CPT1AP50416 NUS1P1-201ENST00000446295 882 ntBASIC20.91■□□□□ 0.94
CPT1AP50416 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.91■□□□□ 0.94
CPT1AP50416 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.91■□□□□ 0.94
CPT1AP50416 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.91■□□□□ 0.94
CPT1AP50416 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.91■□□□□ 0.94
CPT1AP50416 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.91■□□□□ 0.94
CPT1AP50416 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.91■□□□□ 0.94
CPT1AP50416 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.91■□□□□ 0.94
CPT1AP50416 TREX1-205ENST00000625293 1783 ntBASIC20.91■□□□□ 0.94
CPT1AP50416 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPT1AP50416 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPT1AP50416 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPT1AP50416 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPT1AP50416 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CPT1AP50416 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPT1AP50416 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPT1AP50416 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CPT1AP50416 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.9■□□□□ 0.94
CPT1AP50416 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CPT1AP50416 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPT1AP50416 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPT1AP50416 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPT1AP50416 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CPT1AP50416 AC004870.1-201ENST00000315132 882 ntBASIC20.9■□□□□ 0.94
CPT1AP50416 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPT1AP50416 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPT1AP50416 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.9■□□□□ 0.94
CPT1AP50416 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CPT1AP50416 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.9■□□□□ 0.94
CPT1AP50416 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.9■□□□□ 0.94
CPT1AP50416 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.9■□□□□ 0.94
CPT1AP50416 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.9■□□□□ 0.94
CPT1AP50416 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPT1AP50416 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
CPT1AP50416 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPT1AP50416 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPT1AP50416 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPT1AP50416 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.89■□□□□ 0.94
CPT1AP50416 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPT1AP50416 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.89■□□□□ 0.94
CPT1AP50416 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.89■□□□□ 0.93
CPT1AP50416 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.89■□□□□ 0.93
CPT1AP50416 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPT1AP50416 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CPT1AP50416 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPT1AP50416 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.89■□□□□ 0.93
CPT1AP50416 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.89■□□□□ 0.93
CPT1AP50416 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.89■□□□□ 0.93
CPT1AP50416 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.89■□□□□ 0.93
CPT1AP50416 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.89■□□□□ 0.93
CPT1AP50416 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.89■□□□□ 0.93
CPT1AP50416 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms