Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL12P48061 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CXCL12P48061 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL12P48061 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL12P48061 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.8■□□□□ 0.6
CXCL12P48061 AL109659.2-201ENST00000606809 1674 ntBASIC18.8■□□□□ 0.6
CXCL12P48061 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL12P48061 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL12P48061 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL12P48061 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL12P48061 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL12P48061 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL12P48061 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.8■□□□□ 0.6
CXCL12P48061 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.8■□□□□ 0.6
CXCL12P48061 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL12P48061 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.8■□□□□ 0.6
CXCL12P48061 HOXB1-202ENST00000577092 1414 ntBASIC18.8■□□□□ 0.6
CXCL12P48061 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL12P48061 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.8■□□□□ 0.6
CXCL12P48061 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL12P48061 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL12P48061 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CXCL12P48061 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.79■□□□□ 0.6
CXCL12P48061 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL12P48061 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CXCL12P48061 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL12P48061 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL12P48061 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL12P48061 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL12P48061 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL12P48061 PMS2P1-201ENST00000431037 1228 ntBASIC18.79■□□□□ 0.6
CXCL12P48061 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.79■□□□□ 0.6
CXCL12P48061 GUSBP12-201ENST00000513727 720 ntBASIC18.79■□□□□ 0.6
CXCL12P48061 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.79■□□□□ 0.6
CXCL12P48061 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.79■□□□□ 0.6
CXCL12P48061 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.79■□□□□ 0.6
CXCL12P48061 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL12P48061 GPR32P1-201ENST00000601788 811 ntBASIC18.79■□□□□ 0.6
CXCL12P48061 AL671883.3-201ENST00000603274 991 ntBASIC18.79■□□□□ 0.6
CXCL12P48061 AC139530.3-201ENST00000620344 690 ntBASIC18.79■□□□□ 0.6
CXCL12P48061 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL12P48061 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL12P48061 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.79■□□□□ 0.6
CXCL12P48061 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.79■□□□□ 0.6
CXCL12P48061 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL12P48061 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CXCL12P48061 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CXCL12P48061 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL12P48061 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL12P48061 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CXCL12P48061 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.78■□□□□ 0.6
CXCL12P48061 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.78■□□□□ 0.6
CXCL12P48061 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL12P48061 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.78■□□□□ 0.6
CXCL12P48061 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL12P48061 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CXCL12P48061 IGHV3-47-201ENST00000425060 335 ntBASIC18.78■□□□□ 0.6
CXCL12P48061 SAPCD2P3-201ENST00000455031 850 ntBASIC18.78■□□□□ 0.6
CXCL12P48061 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CXCL12P48061 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CXCL12P48061 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.78■□□□□ 0.6
CXCL12P48061 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.78■□□□□ 0.6
CXCL12P48061 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.78■□□□□ 0.6
CXCL12P48061 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.78■□□□□ 0.6
CXCL12P48061 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CXCL12P48061 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.78■□□□□ 0.6
CXCL12P48061 AF228730.7-201ENST00000641842 219 ntBASIC18.78■□□□□ 0.6
CXCL12P48061 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL12P48061 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CXCL12P48061 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL12P48061 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL12P48061 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL12P48061 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.78■□□□□ 0.6
CXCL12P48061 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CXCL12P48061 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL12P48061 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CXCL12P48061 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.77■□□□□ 0.6
CXCL12P48061 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.77■□□□□ 0.6
CXCL12P48061 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.77■□□□□ 0.6
CXCL12P48061 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL12P48061 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL12P48061 AKR1C7P-201ENST00000305623 895 ntBASIC18.77■□□□□ 0.6
CXCL12P48061 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL12P48061 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CXCL12P48061 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CXCL12P48061 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL12P48061 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL12P48061 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CXCL12P48061 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.77■□□□□ 0.6
CXCL12P48061 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.77■□□□□ 0.6
CXCL12P48061 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.77■□□□□ 0.6
CXCL12P48061 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL12P48061 VENTXP7-201ENST00000475503 772 ntBASIC18.77■□□□□ 0.6
CXCL12P48061 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.77■□□□□ 0.6
CXCL12P48061 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.77■□□□□ 0.6
CXCL12P48061 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.77■□□□□ 0.6
CXCL12P48061 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL12P48061 AC124864.1-201ENST00000623408 392 ntBASIC18.77■□□□□ 0.6
CXCL12P48061 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.77■□□□□ 0.6
CXCL12P48061 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms