Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.26■□□□□ 0.99
HTTP42858 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HTTP42858 HNRNPDP1-201ENST00000439535 754 ntBASIC21.26■□□□□ 0.99
HTTP42858 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HTTP42858 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HTTP42858 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HTTP42858 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.25■□□□□ 0.99
HTTP42858 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HTTP42858 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HTTP42858 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
HTTP42858 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HTTP42858 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.25■□□□□ 0.99
HTTP42858 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.25■□□□□ 0.99
HTTP42858 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.25■□□□□ 0.99
HTTP42858 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HTTP42858 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.25■□□□□ 0.99
HTTP42858 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HTTP42858 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HTTP42858 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HTTP42858 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HTTP42858 AF186996.4-201ENST00000467186 377 ntBASIC21.25■□□□□ 0.99
HTTP42858 AC005332.3-201ENST00000589904 676 ntBASIC21.25■□□□□ 0.99
HTTP42858 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HTTP42858 TREX1-205ENST00000625293 1783 ntBASIC21.25■□□□□ 0.99
HTTP42858 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HTTP42858 AC073314.1-201ENST00000568729 2216 ntBASIC21.25■□□□□ 0.99
HTTP42858 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.24■□□□□ 0.99
HTTP42858 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HTTP42858 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HTTP42858 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.24■□□□□ 0.99
HTTP42858 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HTTP42858 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.24■□□□□ 0.99
HTTP42858 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.24■□□□□ 0.99
HTTP42858 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
HTTP42858 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
HTTP42858 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HTTP42858 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HTTP42858 KRT18P23-201ENST00000435622 1283 ntBASIC21.24■□□□□ 0.99
HTTP42858 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC21.24■□□□□ 0.99
HTTP42858 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.24■□□□□ 0.99
HTTP42858 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.24■□□□□ 0.99
HTTP42858 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.24■□□□□ 0.99
HTTP42858 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HTTP42858 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HTTP42858 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC21.24■□□□□ 0.99
HTTP42858 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.24■□□□□ 0.99
HTTP42858 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HTTP42858 AC027601.4-201ENST00000611259 610 ntBASIC21.24■□□□□ 0.99
HTTP42858 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HTTP42858 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HTTP42858 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HTTP42858 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HTTP42858 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HTTP42858 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HTTP42858 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.23■□□□□ 0.99
HTTP42858 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.23■□□□□ 0.99
HTTP42858 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.23■□□□□ 0.99
HTTP42858 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HTTP42858 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.23■□□□□ 0.99
HTTP42858 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HTTP42858 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
HTTP42858 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.23■□□□□ 0.99
HTTP42858 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.23■□□□□ 0.99
HTTP42858 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.23■□□□□ 0.99
HTTP42858 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HTTP42858 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HTTP42858 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HTTP42858 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HTTP42858 IMP4-203ENST00000409935 958 ntTSL 5 BASIC21.22■□□□□ 0.99
HTTP42858 FAM215A-202ENST00000632077 792 ntBASIC21.22■□□□□ 0.99
HTTP42858 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HTTP42858 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HTTP42858 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HTTP42858 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HTTP42858 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HTTP42858 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
HTTP42858 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.22■□□□□ 0.99
HTTP42858 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HTTP42858 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
HTTP42858 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.22■□□□□ 0.99
HTTP42858 MIR3197-201ENST00000582241 73 ntBASIC21.22■□□□□ 0.99
HTTP42858 AC134684.3-201ENST00000641758 218 ntBASIC21.22■□□□□ 0.99
HTTP42858 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HTTP42858 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HTTP42858 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HTTP42858 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HTTP42858 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.21■□□□□ 0.99
HTTP42858 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.21■□□□□ 0.99
HTTP42858 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.21■□□□□ 0.99
HTTP42858 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HTTP42858 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HTTP42858 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HTTP42858 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.21■□□□□ 0.99
HTTP42858 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HTTP42858 UPF3AP3-201ENST00000420996 769 ntBASIC21.21■□□□□ 0.99
HTTP42858 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.21■□□□□ 0.99
HTTP42858 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.21■□□□□ 0.99
HTTP42858 RN7SL606P-201ENST00000472779 293 ntBASIC21.21■□□□□ 0.99
HTTP42858 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.21■□□□□ 0.99
HTTP42858 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms