Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KCNA3P22001 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC23.17■■□□□ 1.3
KCNA3P22001 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC23.17■■□□□ 1.3
KCNA3P22001 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KCNA3P22001 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
KCNA3P22001 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC23.17■■□□□ 1.3
KCNA3P22001 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
KCNA3P22001 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
KCNA3P22001 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
KCNA3P22001 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC23.17■■□□□ 1.3
KCNA3P22001 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.17■■□□□ 1.3
KCNA3P22001 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
KCNA3P22001 HOXB1-202ENST00000577092 1414 ntBASIC23.16■■□□□ 1.3
KCNA3P22001 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KCNA3P22001 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KCNA3P22001 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KCNA3P22001 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
KCNA3P22001 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
KCNA3P22001 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC23.16■■□□□ 1.3
KCNA3P22001 GGCT-205ENST00000409436 954 ntTSL 3 BASIC23.16■■□□□ 1.3
KCNA3P22001 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC23.16■■□□□ 1.3
KCNA3P22001 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
KCNA3P22001 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
KCNA3P22001 AC018712.1-201ENST00000455767 687 ntBASIC23.16■■□□□ 1.3
KCNA3P22001 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC23.16■■□□□ 1.3
KCNA3P22001 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC23.16■■□□□ 1.3
KCNA3P22001 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC23.16■■□□□ 1.3
KCNA3P22001 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
KCNA3P22001 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
KCNA3P22001 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC23.16■■□□□ 1.3
KCNA3P22001 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.16■■□□□ 1.3
KCNA3P22001 KRT8P7-201ENST00000533003 1432 ntBASIC23.16■■□□□ 1.3
KCNA3P22001 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC23.16■■□□□ 1.3
KCNA3P22001 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KCNA3P22001 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KCNA3P22001 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
KCNA3P22001 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
KCNA3P22001 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.15■■□□□ 1.3
KCNA3P22001 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KCNA3P22001 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.15■■□□□ 1.3
KCNA3P22001 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.15■■□□□ 1.3
KCNA3P22001 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KCNA3P22001 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KCNA3P22001 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC23.15■■□□□ 1.3
KCNA3P22001 MIR940-201ENST00000401276 94 ntBASIC23.15■■□□□ 1.3
KCNA3P22001 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC23.15■■□□□ 1.3
KCNA3P22001 AC073648.2-201ENST00000510116 352 ntBASIC23.15■■□□□ 1.3
KCNA3P22001 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC23.15■■□□□ 1.3
KCNA3P22001 MIR7706-201ENST00000613747 67 ntBASIC23.15■■□□□ 1.3
KCNA3P22001 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
KCNA3P22001 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
KCNA3P22001 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.15■■□□□ 1.3
KCNA3P22001 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC23.14■■□□□ 1.3
KCNA3P22001 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
KCNA3P22001 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
KCNA3P22001 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
KCNA3P22001 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
KCNA3P22001 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KCNA3P22001 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KCNA3P22001 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC23.14■■□□□ 1.29
KCNA3P22001 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC23.14■■□□□ 1.29
KCNA3P22001 GUSBP12-201ENST00000513727 720 ntBASIC23.14■■□□□ 1.29
KCNA3P22001 PGAM5P1-201ENST00000518923 814 ntBASIC23.14■■□□□ 1.29
KCNA3P22001 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC23.14■■□□□ 1.29
KCNA3P22001 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.14■■□□□ 1.29
KCNA3P22001 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC23.14■■□□□ 1.29
KCNA3P22001 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC23.14■■□□□ 1.29
KCNA3P22001 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
KCNA3P22001 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KCNA3P22001 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
KCNA3P22001 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.13■■□□□ 1.29
KCNA3P22001 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
KCNA3P22001 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
KCNA3P22001 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
KCNA3P22001 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
KCNA3P22001 AL109659.2-201ENST00000606809 1674 ntBASIC23.13■■□□□ 1.29
KCNA3P22001 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
KCNA3P22001 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.13■■□□□ 1.29
KCNA3P22001 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
KCNA3P22001 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC23.13■■□□□ 1.29
KCNA3P22001 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
KCNA3P22001 AF186996.4-201ENST00000467186 377 ntBASIC23.13■■□□□ 1.29
KCNA3P22001 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC23.13■■□□□ 1.29
KCNA3P22001 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC23.13■■□□□ 1.29
KCNA3P22001 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC23.13■■□□□ 1.29
KCNA3P22001 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC23.13■■□□□ 1.29
KCNA3P22001 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
KCNA3P22001 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
KCNA3P22001 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.13■■□□□ 1.29
KCNA3P22001 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
KCNA3P22001 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.12■■□□□ 1.29
KCNA3P22001 AC022898.2-201ENST00000616822 1312 ntBASIC23.12■■□□□ 1.29
KCNA3P22001 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
KCNA3P22001 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23.12■■□□□ 1.29
KCNA3P22001 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
KCNA3P22001 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
KCNA3P22001 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
KCNA3P22001 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
KCNA3P22001 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
KCNA3P22001 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms